maker-pag1_scaffold_1093-fgenesh-gene-0.1 (Pythium aphanidermatum)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03638 (TCR) IPR005172 maker-pag1_scaffold_1093-fgenesh-gene-0.1 T345533_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCX3
M01087_2.00 		Arabidopsis thaliana
NNDTTYAAAH
DTTTRAAHNN		 PBM
Sullivan et al.(2014)
pTH7218 		0.672 0.573
TCX3
M02522_2.00 		Arabidopsis thaliana
WTTYAAAH
DTTTRAAW		 PBM
Weirauch et al.(2014)
pTH7421 		0.672 0.573
TCX3
M07297_2.00 		Arabidopsis thaliana
DWTTYRAAWTTBAAW
WTTVAAATTYRAAWH		 Dap-seq
OMalley et al.(2016)
SOL1_colamp_a 		0.672 0.573
TCX3
M07298_2.00 		Arabidopsis thaliana
WTWWAAAATTYAAAW
WTTTRAATTTTWWAW		 Dap-seq
OMalley et al.(2016)
SOL1_col 		0.672 0.573
BRADI1G55710
M02525_2.00 		Brachypodium distachyon
NVTBYRVABN
NVTBYRVABN		 PBM
Weirauch et al.(2014)
pTH9241 		0.672 0.560
PK22848.1
M02532_2.00 		Cannabis sativa
NNNYNAAATTTNN
NNAAATTTNRNNN		 PBM
Weirauch et al.(2014)
pTH9724 		0.672 0.560
TCX2
M07300_2.00 		Arabidopsis thaliana
WWTYVAAATTYRAAW
WTTYRAATTTBRAWW		 Dap-seq
OMalley et al.(2016)
TCX2_col_a 		0.672 0.560
TCX2
M07301_2.00 		Arabidopsis thaliana
TTYVAAATTYRAAW
WTTYRAATTTBRAA		 Dap-seq
OMalley et al.(2016)
TCX2_colamp_a 		0.672 0.560
TCX4
M02521_2.00 		Arabidopsis thaliana
DWTTYRAAWH
DWTTYRAAWH		 PBM
Weirauch et al.(2014)
pTH7573 		0.672 0.547
TSO1
M07299_2.00 		Arabidopsis thaliana
WWWTWDAAATTYAAA
TTTRAATTTHWAWWW		 Dap-seq
OMalley et al.(2016)
TSO1_col_a 		0.672 0.547
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00 		Ostreococcus tauri
NNNNNRHNN
NNDYNNNNN		 PBM
Weirauch et al.(2014)
pTH9457 		0.672 0.533
AT2G20110
M02520_2.00 		Arabidopsis thaliana
DTTTAAAH
DTTTAAAH		 PBM
Weirauch et al.(2014)
pTH7914 		0.672 0.520
TCX5
M02523_2.00 		Arabidopsis thaliana
NRTTCAAAYN
NRTTTGAAYN		 PBM
Weirauch et al.(2014)
pTH8164 		0.672 0.520
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00 		Chlorella vulgaris
NNNNDYRAAH
DTTYRHNNNN		 PBM
Weirauch et al.(2014)
pTH9252 		0.672 0.520
AT2G20110
M07295_2.00 		Arabidopsis thaliana
WWHWAADATTYAAAW
WTTTRAATHTTWDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_col_a 		0.672 0.520
AT2G20110
M07296_2.00 		Arabidopsis thaliana
WWHNAAATTYAAAHN
NDTTTRAATTTNDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a 		0.672 0.520
AT5G25790
M01319_2.00 		Arabidopsis thaliana
NHYRAAHN
NDTTYRDN		 PBM
Lambert et al.(2019)
pTH11533 		0.672 0.507
gw1.20.00.89.1
M02535_2.00 		Ostreococcus tauri
WNYWBVWRNW
WNYWBVWRNW		 PBM
Weirauch et al.(2014)
pTH9647 		0.672 0.507
PK27683.1
M01322_2.00 		Cannabis sativa
NDTTYAAAH
DTTTRAAHN		 PBM
Lambert et al.(2019)
pTH11347 		0.672 0.493
LIN54
M02527_2.00 		Gallus gallus
NRTTYAAAH
DTTTRAAYN		 PBM
Weirauch et al.(2014)
pTH8566 		0.672 0.467
SPU_025306
M02531_2.00 		Strongylocentrotus purpuratus
NNNNWYRAAH
DTTYRWNNNN		 PBM
Weirauch et al.(2014)
pTH9286 		0.672 0.467
BGIBMGA008956
M02524_2.00 		Bombyx mori
AATTTAAAW
WTTTAAATT		 PBM
Weirauch et al.(2014)
pTH9238 		0.672 0.453
lin54
M02526_2.00 		Danio rerio
NHTYRAAH
DTTYRADN		 PBM
Weirauch et al.(2014)
pTH8399 		0.672 0.453
ENSTSYG00000005291
M02528_2.00 		Tarsius syrichta
NNWDHDHWNN
NNWDHDHWNN		 PBM
Weirauch et al.(2014)
pTH9366 		0.672 0.453
GE12548
M02529_2.00 		Drosophila yakuba
DTTYAAAY
RTTTRAAH		 PBM
Weirauch et al.(2014)
pTH9262 		0.672 0.453
GSPATT00010696001
M02530_2.00 		Paramecium tetraurelia
NNBRAAHN
NDTTYVNN		 PBM
Weirauch et al.(2014)
pTH8720 		0.672 0.453
NEMVEDRAFT_v1g111410
M01320_2.00 		Nematostella vectensis
NNNNYRWRN
NYWYRNNNN		 PBM
Lambert et al.(2019)
pTH9771 		0.672 0.440
XP_002124866.1
M01321_2.00 		Ciona intestinalis
NDTTYRAAN
NTTYRAAHN		 PBM
Lambert et al.(2019)
pTH9835 		0.672 0.440
For this family, TFs with SR scores > 0.660 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EPrPA00000024601 TCR/CxC 503 540
EPrPA00000024601 TCR/CxC 590 627

Links

Other TCR/CxC family TFs
Other Pythium aphanidermatum TFs

1213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R000237 Calypte anna Aan_R000237 I
Aan_R005677 Calypte anna Aan_R005677 I
Aan_R011482 Calypte anna Aan_R011482 I
ACYPI32234 Acyrthosiphon pisum ACYPI32234 I
Afo_R004508 Aptenodytes forsteri Afo_R004508 I
Afo_R004731 Aptenodytes forsteri Afo_R004731 I
Alligator_sinensis_CCG002912.1 Alligator sinensis Alligator_sinensis_CCG002912.1 I
ATF3 Anolis carolinensis ENSACAG00000006353 I
ATF3 Bos taurus ENSBTAG00000008545 I
ATF3 Canis familiaris ENSCAFG00000012339 I
ATF3 Choloepus hoffmanni ENSCHOG00000010259 I
ATF3 Callithrix jacchus ENSCJAG00000015735 I
atf3 Danio rerio ENSDARG00000007823 I
ATF3 Equus caballus ENSECAG00000011486 I
ATF3 Erinaceus europaeus ENSEEUG00000010993 I
ATF3 Echinops telfairi ENSETEG00000015701 I
ATF3 Felis catus ENSFCAG00000029636 I
ATF3 Homo sapiens ENSG00000162772 D
atf3 Gasterosteus aculeatus ENSGACG00000011997 I
ATF3 Gallus gallus ENSGALG00000025887 I
ATF3 Gorilla gorilla ENSGGOG00000014206 I
ATF3 Loxodonta africana ENSLAFG00000032487 I
ATF3 Meleagris gallopavo ENSMGAG00000009708 I
ATF3 Myotis lucifugus ENSMLUG00000015048 I
ATF3 Macaca mulatta ENSMMUG00000012185 I
ATF3 Monodelphis domestica ENSMODG00000003042 I
Atf3 Mus musculus ENSMUSG00000026628 D
ATF3 Ornithorhynchus anatinus ENSOANG00000008502 I
ATF3 Oryctolagus cuniculus ENSOCUG00000017424 I
ATF3 Otolemur garnettii ENSOGAG00000005803 I
ATF3 Ochotona princeps ENSOPRG00000013252 I
atf3 Oryzias latipes ENSORLG00000019980 I
ATF3 Procavia capensis ENSPCAG00000000178 I
ATF3 Pan troglodytes ENSPTRG00000001962 I
Atf3 Rattus norvegicus ENSRNOG00000003745 I
ATF3 Sus scrofa ENSSSCG00000015595 I
ATF3 Tupaia belangeri ENSTBEG00000002717 I
ATF3 Taeniopygia guttata ENSTGUG00000003050 I
atf3 Takifugu rubripes ENSTRUG00000015975 I
ATF3 Tursiops truncatus ENSTTRG00000013897 I
ATF3 Vicugna pacos ENSVPAG00000011563 I
Atf3 Drosophila melanogaster FBgn0028550 D
atf3 Xenopus tropicalis XB-GENE-6085251 I
atf3.L Xenopus laevis XB-GENE-6085256 I
Brh_R009866 Buceros rhinoceros Brh_R009866 I
Brh_R010146 Buceros rhinoceros Brh_R010146 I
Cflo_05052--XP_392513.1_APIME Camponotus floridanus Cflo_05052--XP_392513.1_APIME I
CLEC002857 Cimex lectularius CLEC002857 I
Cmyd_10020806 Chelonia mydas Cmyd_10020806 I
DAPPUDRAFT_222762 Daphnia pulex DAPPUDRAFT_222762 I
ENSAMEG00000001342 Ailuropoda melanoleuca ENSAMEG00000001342 I
ENSAMEG00000017284 Ailuropoda melanoleuca ENSAMEG00000017284 I
ENSAMEG00000018337 Ailuropoda melanoleuca ENSAMEG00000018337 I
ENSAMXG00000010494 Astyanax mexicanus ENSAMXG00000010494 I
ENSAMXG00000013804 Astyanax mexicanus ENSAMXG00000013804 I
ENSAMXG00000014502 Astyanax mexicanus ENSAMXG00000014502 I
ENSAPLG00000011380 Anas platyrhynchos ENSAPLG00000011380 I
ENSAPLG00000012304 Anas platyrhynchos ENSAPLG00000012304 I
ENSBTAP00000011265-D1 Bos grunniens ENSBTAP00000011265-D1 I
ENSCING00000002838 Ciona intestinalis ENSCING00000002838 I
ENSCPOG00000006636 Cavia porcellus ENSCPOG00000006636 I
ENSCPOG00000007491 Cavia porcellus ENSCPOG00000007491 I
ENSCPOG00000019424 Cavia porcellus ENSCPOG00000019424 I
ENSCSAG00000008055 Chlorocebus sabaeus ENSCSAG00000008055 I
ENSCSAG00000012122 Chlorocebus sabaeus ENSCSAG00000012122 I
ENSCSAG00000015405 Chlorocebus sabaeus ENSCSAG00000015405 I
ENSCSAVG00000000153 Ciona savignyi ENSCSAVG00000000153 I
ENSDNOG00000044236 Dasypus novemcinctus ENSDNOG00000044236 I
ENSDORG00000006025 Dipodomys ordii ENSDORG00000006025 I
ENSDORG00000012888 Dipodomys ordii ENSDORG00000012888 I
ENSFALG00000006358 Ficedula albicollis ENSFALG00000006358 I
ENSFALG00000012408 Ficedula albicollis ENSFALG00000012408 I
ENSGMOG00000011063 Gadus morhua ENSGMOG00000011063 I
ENSGMOG00000015382 Gadus morhua ENSGMOG00000015382 I
ENSGMOG00000016268 Gadus morhua ENSGMOG00000016268 I
ENSLACG00000001315 Latimeria chalumnae ENSLACG00000001315 I
ENSLACG00000018083 Latimeria chalumnae ENSLACG00000018083 I
ENSLOCG00000000814 Lepisosteus oculatus ENSLOCG00000000814 I
ENSLOCG00000010526 Lepisosteus oculatus ENSLOCG00000010526 I
ENSMEUG00000007708 Macropus eugenii ENSMEUG00000007708 I
ENSMEUG00000011212 Macropus eugenii ENSMEUG00000011212 I
ENSMICG00000016031 Microcebus murinus ENSMICG00000016031 I
ENSMLUG00000002256 Myotis lucifugus ENSMLUG00000002256 I
ENSMMUP00000003747 Macaca fascicularis ENSMMUP00000003747 I
ENSMPUG00000009147 Mustela putorius furo ENSMPUG00000009147 I
ENSMPUG00000011433 Mustela putorius furo ENSMPUG00000011433 I
ENSMPUG00000015864 Mustela putorius furo ENSMPUG00000015864 I
ENSNLEG00000002916 Nomascus leucogenys ENSNLEG00000002916 I
ENSNLEG00000005945 Nomascus leucogenys ENSNLEG00000005945 I
ENSNLEG00000016475 Nomascus leucogenys ENSNLEG00000016475 I
ENSOARG00000000072 Ovis aries ENSOARG00000000072 I
ENSOARG00000001796 Ovis aries ENSOARG00000001796 I
ENSOARG00000010493 Ovis aries ENSOARG00000010493 I
ENSONIG00000015268 Oreochromis niloticus ENSONIG00000015268 I
ENSONIG00000018687 Oreochromis niloticus ENSONIG00000018687 I
ENSONIG00000020186 Oreochromis niloticus ENSONIG00000020186 I
ENSP00000267569-D1 Bos grunniens ENSP00000267569-D1 I
ENSP00000310170 Macaca fascicularis ENSP00000310170 I
ENSP00000310170-D1 Bos grunniens ENSP00000310170-D1 I
ENSP00000355954 Macaca fascicularis ENSP00000355954 I
ENSPANG00000016424 Papio anubis ENSPANG00000016424 I
ENSPANG00000019986 Papio anubis ENSPANG00000019986 I
ENSPANG00000021687 Papio anubis ENSPANG00000021687 I
ENSPFOG00000007886 Poecilia formosa ENSPFOG00000007886 I
ENSPFOG00000007903 Poecilia formosa ENSPFOG00000007903 I
ENSPFOG00000015014 Poecilia formosa ENSPFOG00000015014 I
ENSPFOG00000017099 Poecilia formosa ENSPFOG00000017099 I
ENSPMAG00000000427 Petromyzon marinus ENSPMAG00000000427 I
ENSPPYG00000000235 Pongo abelii ENSPPYG00000000235 I
ENSPPYG00000003041 Pongo abelii ENSPPYG00000003041 I
ENSPPYG00000006004 Pongo abelii ENSPPYG00000006004 I
ENSPSIG00000017647 Pelodiscus sinensis ENSPSIG00000017647 I
ENSPSIG00000017967 Pelodiscus sinensis ENSPSIG00000017967 I
ENSSHAG00000010413 Sarcophilus harrisii ENSSHAG00000010413 I
ENSSHAG00000017391 Sarcophilus harrisii ENSSHAG00000017391 I
ENSSTOG00000003296 Ictidomys tridecemlineatus ENSSTOG00000003296 I
ENSSTOG00000007121 Ictidomys tridecemlineatus ENSSTOG00000007121 I
ENSSTOG00000026831 Ictidomys tridecemlineatus ENSSTOG00000026831 I
ENSTBEG00000014483 Tupaia belangeri ENSTBEG00000014483 I
ENSTNIG00000016355 Tetraodon nigroviridis ENSTNIG00000016355 I
ENSTSYG00000004446 Tarsius syrichta ENSTSYG00000004446 I
ENSTSYG00000010193 Tarsius syrichta ENSTSYG00000010193 I
ENSVPAG00000003090 Vicugna pacos ENSVPAG00000003090 I
ENSXMAG00000004013 Xiphophorus maculatus ENSXMAG00000004013 I
ENSXMAG00000004443 Xiphophorus maculatus ENSXMAG00000004443 I
ENSXMAG00000014805 Xiphophorus maculatus ENSXMAG00000014805 I
FOSL1 Bos taurus ENSBTAG00000006194 I
FOSL1 Canis familiaris ENSCAFG00000013132 I
FOSL1 Callithrix jacchus ENSCJAG00000001776 I
FOSL1 Dasypus novemcinctus ENSDNOG00000003173 I
Fosl1 Dipodomys ordii ENSDORG00000009958 I
FOSL1 Equus caballus ENSECAG00000023092 I
FOSL1 Felis catus ENSFCAG00000013275 I
FOSL1 Homo sapiens ENSG00000175592 D
FOSL1 Gorilla gorilla ENSGGOG00000011411 I
FOSL1 Loxodonta africana ENSLAFG00000001766 I
FOSL1 Microcebus murinus ENSMICG00000012846 I
FOSL1 Myotis lucifugus ENSMLUG00000011050 I
FOSL1 Macaca mulatta ENSMMUG00000008653 I
Fosl1 Mus musculus ENSMUSG00000024912 D
FOSL1 Oryctolagus cuniculus ENSOCUG00000011143 I
FOSL1 Otolemur garnettii ENSOGAG00000016518 I
FOSL1 Ochotona princeps ENSOPRG00000000605 I
FOSL1 Procavia capensis ENSPCAG00000011049 I
FOSL1 Pan troglodytes ENSPTRG00000003901 I
FOSL1 Pteropus vampyrus ENSPVAG00000016964 I
Fosl1 Rattus norvegicus ENSRNOG00000020552 I
FOSL1 Sus scrofa ENSSSCG00000012967 I
FOSL1 Tursiops truncatus ENSTTRG00000016937 I
fosl1 Xenopus tropicalis XB-GENE-6257957 I
GB53401 Apis mellifera GB53401 I
Gfo_R010939 Geospiza fortis Gfo_R010939 I
Gfo_R012906 Geospiza fortis Gfo_R012906 I
HMEL006570 Heliconius melpomene HMEL006570 I
Hsal_14793--XP_392513.1_APIME Harpegnathos saltator Hsal_14793--XP_392513.1_APIME I
ISCW023105 Ixodes scapularis ISCW023105 I
JDP2 Anolis carolinensis ENSACAG00000016944 I
JDP2 Bos taurus ENSBTAG00000009451 I
JDP2 Canis familiaris ENSCAFG00000017042 I
JDP2 Callithrix jacchus ENSCJAG00000020645 I
JDP2 Dasypus novemcinctus ENSDNOG00000033141 I
JDP2 Equus caballus ENSECAG00000014862 I
JDP2 Felis catus ENSFCAG00000029464 I
JDP2 Homo sapiens ENSG00000140044 D
JDP2 Gallus gallus ENSGALG00000010322 I
JDP2 Gorilla gorilla ENSGGOG00000010752 I
JDP2 Loxodonta africana ENSLAFG00000025757 I
JDP2 Meleagris gallopavo ENSMGAG00000012755 I
JDP2 Monodelphis domestica ENSMODG00000005909 I
Jdp2 Mus musculus ENSMUSG00000034271 D
JDP2 Oryctolagus cuniculus ENSOCUG00000008466 I
JDP2 Otolemur garnettii ENSOGAG00000024796 I
JDP2 Ochotona princeps ENSOPRG00000012032 I
JDP2 Pan troglodytes ENSPTRG00000006555 I
JDP2 Pteropus vampyrus ENSPVAG00000000672 I
Jdp2 Rattus norvegicus ENSRNOG00000008224 D
JDP2 Taeniopygia guttata ENSTGUG00000012219 I
jdp2a Danio rerio ENSDARG00000040137 I
jdp2a Gasterosteus aculeatus ENSGACG00000007611 I
jdp2a Oryzias latipes ENSORLG00000016515 I
jdp2a Tetraodon nigroviridis ENSTNIG00000017406 I
jdp2a Takifugu rubripes ENSTRUG00000018323 I
jdp2b Danio rerio ENSDARG00000020133 I
jdp2b Gasterosteus aculeatus ENSGACG00000010513 I
jdp2b Oryzias latipes ENSORLG00000017506 I
jdp2b Takifugu rubripes ENSTRUG00000010344 I
KGM_03513 Danaus plexippus KGM_03513 I
L798_12793 Zootermopsis nevadensis L798_12793 I
MCINX010628 Melitaea cinxia MCINX010628 I
Myotis_brandtii_Atf3_10018256 Myotis brandtii Myotis_brandtii_Atf3_10018256 I
Myotis_brandtii_FOSL1_10030743 Myotis brandtii Myotis_brandtii_FOSL1_10030743 I
Myotis_brandtii_JDP2_10012947 Myotis brandtii Myotis_brandtii_JDP2_10012947 I
NV16727 Nasonia vitripennis NV16727 I
Ogr08030 Ophisaurus gracilis Ogr08030 I
Ogr11165 Ophisaurus gracilis Ogr11165 I
PHUM288370 Pediculus humanus PHUM288370 I
Pvit_01216 Pogona vitticeps Pvit_01216 I
Pvit_05292 Pogona vitticeps Pvit_05292 I
Pvit_13387 Pogona vitticeps Pvit_13387 I
RPRC001561 Rhodnius prolixus RPRC001561 I
SINV20083 Solenopsis invicta SINV20083 I
Tal_R002996 Tyto alba Tal_R002996 I