MTR_1g086980 (Medicago truncatula)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03638 (TCR) IPR005172 MTR_1g086980 T345561_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
gw1.20.00.89.1
M02535_2.00
Ostreococcus tauri
WNYWBVWRNW

WNYWBVWRNW
PBM
Weirauch et al.(2014)
pTH9647
0.672 0.225
BGIBMGA008956
M02524_2.00
Bombyx mori
AATTTAAAW

WTTTAAATT
PBM
Weirauch et al.(2014)
pTH9238
0.672 0.200
GE12548
M02529_2.00
Drosophila yakuba
DTTYAAAY

RTTTRAAH
PBM
Weirauch et al.(2014)
pTH9262
0.672 0.200
NEMVEDRAFT_v1g111410
M01320_2.00
Nematostella vectensis
NNNNYRWRN

NYWYRNNNN
PBM
Lambert et al.(2019)
pTH9771
0.672 0.200
SPU_025306
M02531_2.00
Strongylocentrotus purpuratus
NNNNWYRAAH

DTTYRWNNNN
PBM
Weirauch et al.(2014)
pTH9286
0.672 0.200
XP_002124866.1
M01321_2.00
Ciona intestinalis
NDTTYRAAN

NTTYRAAHN
PBM
Lambert et al.(2019)
pTH9835
0.672 0.200
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00
Ostreococcus tauri
NNNNNRHNN

NNDYNNNNN
PBM
Weirauch et al.(2014)
pTH9457
0.672 0.200
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00
Chlorella vulgaris
NNNNDYRAAH

DTTYRHNNNN
PBM
Weirauch et al.(2014)
pTH9252
0.672 0.200
TCX4
M02521_2.00
Arabidopsis thaliana
DWTTYRAAWH

DWTTYRAAWH
PBM
Weirauch et al.(2014)
pTH7573
0.672 0.197
TCX3
M01087_2.00
Arabidopsis thaliana
NNDTTYAAAH

DTTTRAAHNN
PBM
Sullivan et al.(2014)
pTH7218
0.672 0.197
ENSTSYG00000005291
M02528_2.00
Tarsius syrichta
NNWDHDHWNN

NNWDHDHWNN
PBM
Weirauch et al.(2014)
pTH9366
0.672 0.203
TCX3
M02522_2.00
Arabidopsis thaliana
WTTYAAAH

DTTTRAAW
PBM
Weirauch et al.(2014)
pTH7421
0.672 0.197
PK27683.1
M01322_2.00
Cannabis sativa
NDTTYAAAH

DTTTRAAHN
PBM
Lambert et al.(2019)
pTH11347
0.672 0.203
TCX3
M07297_2.00
Arabidopsis thaliana
DWTTYRAAWTTBAAW

WTTVAAATTYRAAWH
Dap-seq
OMalley et al.(2016)
SOL1_colamp_a
0.672 0.197
AT2G20110
M02520_2.00
Arabidopsis thaliana
DTTTAAAH

DTTTAAAH
PBM
Weirauch et al.(2014)
pTH7914
0.672 0.200
TCX3
M07298_2.00
Arabidopsis thaliana
WTWWAAAATTYAAAW

WTTTRAATTTTWWAW
Dap-seq
OMalley et al.(2016)
SOL1_col
0.672 0.197
TCX5
M02523_2.00
Arabidopsis thaliana
NRTTCAAAYN

NRTTTGAAYN
PBM
Weirauch et al.(2014)
pTH8164
0.672 0.200
lin54
M02526_2.00
Danio rerio
NHTYRAAH

DTTYRADN
PBM
Weirauch et al.(2014)
pTH8399
0.672 0.200
LIN54
M02527_2.00
Gallus gallus
NRTTYAAAH

DTTTRAAYN
PBM
Weirauch et al.(2014)
pTH8566
0.672 0.200
AT2G20110
M07295_2.00
Arabidopsis thaliana
WWHWAADATTYAAAW

WTTTRAATHTTWDWW
Dap-seq
OMalley et al.(2016)
AT2G20110_col_a
0.672 0.200
AT2G20110
M07296_2.00
Arabidopsis thaliana
WWHNAAATTYAAAHN

NDTTTRAATTTNDWW
Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a
0.672 0.200
TSO1
M07299_2.00
Arabidopsis thaliana
WWWTWDAAATTYAAA

TTTRAATTTHWAWWW
Dap-seq
OMalley et al.(2016)
TSO1_col_a
0.672 0.200
BRADI1G55710
M02525_2.00
Brachypodium distachyon
NVTBYRVABN

NVTBYRVABN
PBM
Weirauch et al.(2014)
pTH9241
0.672 0.197
PK22848.1
M02532_2.00
Cannabis sativa
NNNYNAAATTTNN

NNAAATTTNRNNN
PBM
Weirauch et al.(2014)
pTH9724
0.672 0.197
TCX2
M07300_2.00
Arabidopsis thaliana
WWTYVAAATTYRAAW

WTTYRAATTTBRAWW
Dap-seq
OMalley et al.(2016)
TCX2_col_a
0.672 0.197
TCX2
M07301_2.00
Arabidopsis thaliana
TTYVAAATTYRAAW

WTTYRAATTTBRAA
Dap-seq
OMalley et al.(2016)
TCX2_colamp_a
0.672 0.184
AT5G25790
M01319_2.00
Arabidopsis thaliana
NHYRAAHN

NDTTYRDN
PBM
Lambert et al.(2019)
pTH11533
0.672 0.173
GSPATT00010696001
M02530_2.00
Paramecium tetraurelia
NNBRAAHN

NDTTYVNN
PBM
Weirauch et al.(2014)
pTH8720
0.672 0.187
For this family, TFs with SR scores > 0.660 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES61647 TCR/CxC 619 655
KEH43196 TCR/CxC 599 635
KEH43197 TCR/CxC 547 583
KEH43198 TCR/CxC 609 645
KEH43199 TCR/CxC 419 455
KEH43200 TCR/CxC 609 645
KEH43201 TCR/CxC 609 643
KEH43202 TCR/CxC 609 645
KEH43203 TCR/CxC 547 583
KEH43204 TCR/CxC 568 604

Links

Other TCR/CxC family TFs
Other Medicago truncatula TFs

1214 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AB02848.1 Alternaria brassicicola AB02848.1 I
ACLA_035940 Aspergillus clavatus CADACLAG00003762 I
AFUA_3G08010 Aspergillus fumigatus CADAFUAG00005137 I
ANIA_02919 Aspergillus nidulans CADANIAG00010168 N
BAUCODRAFT_113280 Baudoinia compniacensis BAUCODRAFT_113280 I
BBA_00050 Beauveria bassiana BBA_00050 I
Bcin15g01900 Botrytis cinerea Bcin15g01900 I
CFIO01_12627 Colletotrichum fioriniae CFIO01_12627 I
CH063_12017 Colletotrichum higginsianum CH063_12017 I
CHGG_00776 Chaetomium globosum CHGG_00776 I
CIMG_02350 Coccidioides immitis CIMG_02350 I
CMQ_2957 Grosmannia clavigera CMQ_2957 I
Cob_12302 Colletotrichum orbiculare Cob_12302 I
COCC4DRAFT_132281 Bipolaris maydis COCC4DRAFT_132281 I
COCCADRAFT_34587 Bipolaris zeicola COCCADRAFT_34587 I
COCMIDRAFT_89546 Bipolaris oryzae COCMIDRAFT_89546 I
COCSADRAFT_161815 Bipolaris sorokiniana COCSADRAFT_161815 I
COCVIDRAFT_94495 Bipolaris victoriae COCVIDRAFT_94495 I
CPC735_039930 Coccidioides posadasii CPC735_039930 I
CSUB01_02419 Colletotrichum sublineola CSUB01_02419 I
CTHT_0059610 Chaetomium thermophilum CTHT_0059610 I
DOTSEDRAFT_40082 Dothistroma septosporum DOTSEDRAFT_40082 I
estExt_fgenesh1_pg.C_chr_11362 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_11362 I
estExt_Genewise1.C_sca_1_chr1_3_00506 Nectria haematococca estExt_Genewise1.C_sca_1_chr1_3_00506 I
estExt_Genewise1Plus.C_40603 Cryphonectria parasitica estExt_Genewise1Plus.C_40603 I
EURHEDRAFT_374243 Aspergillus ruber EURHEDRAFT_374243 I
e_gw1.7.723.1 Neurospora discreta e_gw1.7.723.1 I
F503_00580 Ophiostoma piceae uamh F503_00580 I
FFUJ_01127 Fusarium fujikuroi FFUJ_01127 I
fgenesh1_pg.C_scaffold_1001214 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_1001214 I
fgenesh1_pg.C_scaffold_3000316 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_3000316 I
FGRRES_15757 Fusarium graminearum FGRRES_15757 I
FOXG_00444 Fusarium oxysporum FOXG_00444 I
FPSE_04598 Fusarium pseudograminearum FPSE_04598 I
FVEG_01067 Fusarium verticillioides FVEG_01067 I
GGTG_10245 Gaeumannomyces graminis GGTG_10245 I
GLRG_04524 Colletotrichum graminicola GLRG_04524 I
HCBG_06660 Histoplasma capsulatum HCBG_06660 I
HMPREF1624_01125 Sporothrix schenckii HMPREF1624_01125 I
LEMA_P025640.1 Leptosphaeria maculans LEMA_P025640.1 I
M7I_4857 Glarea lozoyensis M7I_4857 I
MAC_03065 Metarhizium acridum MAC_03065 I
MAJ_00678 Metarhizium majus MAJ_00678 I
MANI_112562 Metarhizium anisopliae MANI_112562 I
MAPG_03212 Magnaporthe poae MAPG_03212 I
MBM_02240 Marssonina brunnea MBM_02240 I
MBR_03431 Metarhizium brunneum MBR_03431 I
MGG_04428 Magnaporthe oryzae MGG_04428 I
MGU_02765 Metarhizium guizhouense MGU_02765 I
MYCFIDRAFT_213472 Pseudocercospora fijiensis MYCFIDRAFT_213472 I
Mycgr3G107598 Zymoseptoria tritici Mycgr3G107598 I
NCU09333 Neurospora crassa NCU09333 D
NechaG57385 Fusarium solani NechaG57385 I
NEUTE1DRAFT_105772 Neurospora tetrasperma NEUTE1DRAFT_105772 I
NFIA_069130 Neosartorya fischeri CADNFIAG00006258 I
OCS_03657 Ophiocordyceps sinensis OCS_03657 I
OIDMADRAFT_127716 Oidiodendron maius OIDMADRAFT_127716 I
PAAG_01715 Paracoccidioides sp lutzii PAAG_01715 I
PABG_03764 Paracoccidioides brasiliensis PABG_03764 I
PEX1_057980 Penicillium expansum PEX1_057980 I
PFICI_01390 Pestalotiopsis fici PFICI_01390 I
PTRG_07931 Pyrenophora triticirepentis PTRG_07931 I
PTT_11966 Pyrenophora teres PTT_11966 I
PVAR5_5909 Byssochlamys spectabilis PVAR5_5909 I
S40285_03272 Stachybotrys chlorohalonata S40285_03272 I
S40288_01364 Stachybotrys chartarum S40288_01364 I
SAPIO_CDS8963 Scedosporium apiospermum SAPIO_CDS8963 I
SBOR_5885 Sclerotinia borealis SBOR_5885 I
SEPMUDRAFT_146274 Sphaerulina musiva SEPMUDRAFT_146274 I
SETTUDRAFT_160143 Setosphaeria turcica SETTUDRAFT_160143 I
SMAC_08482 Sordaria macrospora SMAC_08482 I
SNOG_15249 Stagonospora nodorum SNOG_15249 I
SNOG_15249 Phaeosphaeria nodorum SNOG_15249 I
SPBR_08152 Sporothrix brasiliensis SPBR_08152 I
THITE_2113340 Thielavia terrestris THITE_2113340 I
TRIATDRAFT_83090 Trichoderma atroviride TRIATDRAFT_83090 I
TRIREDRAFT_75418 Trichoderma reesei TRIREDRAFT_75418 I
TRIVIDRAFT_88565 Trichoderma virens TRIVIDRAFT_88565 I
UCREL1_1716 Eutypa lata UCREL1_1716 I
UCRNP2_5297 Neofusicoccum parvum UCRNP2_5297 I
UCRPA7_7219 Togninia minima UCRPA7_7219 I
VDAG_03150 Verticillium dahliae VDAG_03150 I
VDBG_05992 Verticillium alfalfae VDBG_05992 I
VDBG_05992 Verticillium albo atrum VDBG_05992 I
VHEMI03893 Torrubiella hemipterigena VHEMI03893 I