Bo4g195580 (Brassica oleracea)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF08879 (WRC) IPR014977 Bo4g195580 T350733_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRF9
M07370_2.00 		Arabidopsis thaliana
NTGTCAGANNHNNVH
DBNNDNNTCTGACAN		 Dap-seq
OMalley et al.(2016)
GRF9_col_a 		0.872 0.872
GRF9
M07371_2.00 		Arabidopsis thaliana
TGTCAGAN
NTCTGACA		 Dap-seq
OMalley et al.(2016)
GRF9_colamp_a 		0.872 0.872
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g195580.1 WRC 99 141
Bo4g195580.1 WRC 319 361

Links

Other WRC family TFs
Other Brassica oleracea TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP10474 Atta cephalotes ACEP10474 N 0.000
BGLB001559 Biomphalaria glabrata BGLB001559 N 0.000
Cflo_11771--XP_392872.2_APIME Camponotus floridanus Cflo_11771--XP_392872.2_APIME N 0.000
CGI_10013606 Crassostrea gigas CGI_10013606 N 0.000
csin104516 Clonorchis sinensis csin104516 N 0.000
D915_09342 Fasciola hepatica D915_09342 N 0.000
DILT_0000804401 Diphyllobothrium latum DILT_0000804401 N 0.000
EFV59996 Trichinella spiralis EFV59996 N 0.000
EFV60006 Trichinella spiralis EFV60006 N 0.000
GD19379 Drosophila simulans FBgn0085026 N 0.000
HDID_0000158701 Hymenolepis diminuta HDID_0000158701 N 0.000
LLOJ007913 Lutzomyia longipalpis LLOJ007913 I 0.000
MhA1_Contig1584.frz3.gene20 Meloidogyne hapla MhA1_Contig1584.frz3.gene20 N 0.000
MhA1_Contig864.frz3.gene5 Meloidogyne hapla MhA1_Contig864.frz3.gene5 N 0.000
Obox7 Mus musculus ENSMUSG00000055942 I 0.000
PHUM317730 Pediculus humanus PHUM317730 N 0.000
PXEA_0001780701 Protopolystoma xenopodis PXEA_0001780701 N 0.000
PXEA_0002877701 Protopolystoma xenopodis PXEA_0002877701 N 0.000
SBAD_0000181501 Soboliphyme baturini SBAD_0000181501 N 0.000
SCUD_0001375201 Schistosoma curassoni SCUD_0001375201 N 0.000
SCUD_0001462201 Schistosoma curassoni SCUD_0001462201 N 0.000
SINV19440 Solenopsis invicta SINV19440 N 0.000
Smp_030050 Schistosoma mansoni Smp_030050 N 0.000
SMRZ_0000101501 Schistosoma margrebowiei SMRZ_0000101501 N 0.000
SMTD_0000532701 Schistosoma mattheei SMTD_0000532701 N 0.000
SMTD_0001176901 Schistosoma mattheei SMTD_0001176901 N 0.000
SMTD_0001311201 Schistosoma mattheei SMTD_0001311201 N 0.000
SMU15032406 Schmidtea mediterranea SMU15032406 N 0.000
SPER_0000113901 Spirometra erinaceieuropaei SPER_0000113901 N 0.000
SPER_0000700401 Spirometra erinaceieuropaei SPER_0000700401 N 0.000
SROB_0001175701 Schistosoma rodhaini SROB_0001175701 N 0.000
TASK_0001026901 Taenia asiatica TASK_0001026901 N 0.000
TRE_0001513201 Trichobilharzia regenti TRE_0001513201 N 0.000
TsM_000433500 Taenia solium TsM_000433500 N 0.000
TsM_000683500 Taenia solium TsM_000683500 N 0.000
TsM_001091900 Taenia solium TsM_001091900 N 0.000
YQE_02582 Dendroctonus ponderosae YQE_02582 N 0.000