CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Thhalv10017052m.g
(
Eutrema salsugineum
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF08879 (WRC)
IPR014977
Thhalv10017052m.g
T351789_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G42040
M01088_2.00
Arabidopsis thaliana
NBTRCACYNN
NNRGTGYAVN
PBM
Sullivan et al.(2014)
pTH7503
0.977
0.977
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10017052m
WRC
164
206
EEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRVRSMNKSA
Links
Other
WRC
family TFs
Other
Eutrema salsugineum
TFs
91 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP25174
Atta cephalotes
ACEP25174
N
AMAM018479
Anopheles maculatus
AMAM018479
N
AMSG_05308
Thecamonas trahens
AMSG_05308
N
DAPPUDRAFT_6813
Daphnia pulex
DAPPUDRAFT_6813
N
GRMZM2G470307
Zea mays
GRMZM2G470307
N
LPERR01G08190
Leersia perrieri
LPERR01G08190
N
SINV23766
Solenopsis invicta
SINV23766
N
tetur15g00890
Tetranychus urticae
tetur15g00890
N