Thhalv10017052m.g (Eutrema salsugineum)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08879 (WRC) IPR014977 Thhalv10017052m.g T351789_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G42040
M01088_2.00 		Arabidopsis thaliana
NBTRCACYNN
NNRGTGYAVN		 PBM
Sullivan et al.(2014)
pTH7503 		0.977 0.977
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10017052m WRC 164 206

Links

Other WRC family TFs
Other Eutrema salsugineum TFs

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT2G42040 Arabidopsis thaliana AT2G42040 D 1.000
fgenesh2_kg.4__2350__AT2G42040.1 Arabidopsis lyrata fgenesh2_kg.4__2350__AT2G42040.1 I 1.000
Bo3g035920 Brassica oleracea Bo3g035920 I 0.977
Bra000251 Brassica rapa Bra000251 I 0.977
Bostr.25993s0574 Boechera stricta Bostr.25993s0574 I 0.976
Cagra.13389s0020 Capsella grandiflora Cagra.13389s0020 I 0.976
Carubv10023878m.g Capsella rubella Carubv10023878m.g I 0.976
Bo4g014690 Brassica oleracea Bo4g014690 I 0.953
Bra004667 Brassica rapa Bra004667 I 0.930
Bra016897 Brassica rapa Bra016897 I 0.930
Bo4g191280 Brassica oleracea Bo4g191280 I 0.907
PGSC0003DMG400023669 Solanum tuberosum PGSC0003DMG400023669 I 0.884
POPTR_0006s20770 Populus trichocarpa POPTR_0006s20770 I 0.884
POPTR_0016s05840 Populus trichocarpa POPTR_0016s05840 I 0.884
POPTR_0016s05850 Populus trichocarpa POPTR_0016s05850 I 0.884
Solyc10g080530.1 Solanum lycopersicum Solyc10g080530.1 I 0.884
Cucsa.242590 Cucumis sativus Cucsa.242590 I 0.884
Ciclev10012160m.g Citrus clementina Ciclev10012160m.g I 0.884
MDP0000154434 Malus domestica MDP0000154434 I 0.884
orange1.1g019760m.g Citrus sinensis orange1.1g019760m.g I 0.884
SapurV1A.0854s0090 Salix purpurea SapurV1A.0854s0090 I 0.884
GLYMA03G30170 Glycine max GLYMA03G30170 I 0.860
GLYMA09G16841 Glycine max GLYMA09G16841 I 0.860
GLYMA19G33070 Glycine max GLYMA19G33070 I 0.860
GSMUA_Achr10G29530_001 Musa acuminata GSMUA_Achr10G29530_001 I 0.860
GSMUA_Achr7G18600_001 Musa acuminata GSMUA_Achr7G18600_001 I 0.860
GSMUA_Achr9G15730_001 Musa acuminata GSMUA_Achr9G15730_001 I 0.860
MTR_1g054175 Medicago truncatula MTR_1g054175 I 0.860
MTR_7g093350 Medicago truncatula MTR_7g093350 I 0.860
MTR_7g093360 Medicago truncatula MTR_7g093360 I 0.860
POPTR_0006s20790 Populus trichocarpa POPTR_0006s20790 I 0.860
PRUPE_ppa016277mg Prunus persica PRUPE_ppa016277mg I 0.860
TCM_024932 Theobroma cacao TCM_024932 I 0.860
VIT_08s0007g06640 Vitis vinifera VIT_08s0007g06640 I 0.860
Ca_07320 Cicer arietinum Ca_07320 I 0.860
Pm025936 Prunus mume Pm025936 I 0.860
29613.m000377 Ricinus communis 29613.m000377 I 0.860
29613.m000379 Ricinus communis 29613.m000379 I 0.860
cassava31648.valid.m1 Manihot esculenta cassava31648.valid.m1 I 0.860
cassava36463.valid.m1 Manihot esculenta cassava36463.valid.m1 I 0.860
cassava36464.valid.m1 Manihot esculenta cassava36464.valid.m1 I 0.860
Eucgr.A02456 Eucalyptus grandis Eucgr.A02456 I 0.860
evm.TU.supercontig_85.54 Carica papaya evm.TU.supercontig_85.54 I 0.860
gene00456-v1.0-hybrid Fragaria vesca gene00456-v1.0-hybrid I 0.860
Gorai.012G100300 Gossypium raimondii Gorai.012G100300 I 0.860
MDP0000121493 Malus domestica MDP0000121493 I 0.860
SapurV1A.0854s0100 Salix purpurea SapurV1A.0854s0100 I 0.860
PK26699.1 Cannabis sativa PK26699.1 I 0.860
GLYMA02G28962 Glycine max GLYMA02G28962 I 0.837
GSMUA_Achr3G07730_001 Musa acuminata GSMUA_Achr3G07730_001 I 0.837
GSMUA_Achr3G20210_001 Musa acuminata GSMUA_Achr3G20210_001 I 0.837
Gorai.002G156300 Gossypium raimondii Gorai.002G156300 I 0.837
SapurV1A.0251s0220 Salix purpurea SapurV1A.0251s0220 I 0.837
SapurV1A.0251s0230 Salix purpurea SapurV1A.0251s0230 I 0.837
SapurV1A.3188s0010 Salix purpurea SapurV1A.3188s0010 I 0.837
LjT35F01.80.nd Lotus japonicus LjT35F01.80.nd I 0.837
PDK_20s1436981g002 Phoenix dactylifera PDK_20s1436981g002 I 0.837
VIT_08s0007g06690 Vitis vinifera VIT_08s0007g06690 I 0.814
LPERR02G28190 Leersia perrieri LPERR02G28190 I 0.810
Sb10g006810 Sorghum bicolor Sb10g006810 I 0.810
Pavir.J23833 Panicum virgatum Pavir.J23833 I 0.810
Pavir.J25248 Panicum virgatum Pavir.J25248 I 0.810
F775_01928 Aegilops tauschii F775_01928 I 0.792
BGIOSGA005516 Oryza indica BGIOSGA005516 I 0.791
BRADI1G46270 Brachypodium distachyon BRADI1G46270 I 0.791
OBART06G06800 Oryza barthii OBART06G06800 I 0.791
OGLUM02G35430 Oryza glumaepatula OGLUM02G35430 I 0.791
OMERI02G32570 Oryza meridionalis OMERI02G32570 I 0.791
ONIVA02G36360 Oryza nivara ONIVA02G36360 I 0.791
OPUNC02G31650 Oryza punctata OPUNC02G31650 I 0.791
ORGLA02G0296600 Oryza glaberrima ORGLA02G0296600 I 0.791
ORUFI02G35820 Oryza rufipogon ORUFI02G35820 I 0.791
OS02G0773600 Oryza sativa OS02G0773600 I 0.791
Aquca_014_00855 Aquilegia coerulea Aquca_014_00855 I 0.791
BGIOSGA022518 Oryza indica BGIOSGA022518 I 0.786
LPERR06G06210 Leersia perrieri LPERR06G06210 I 0.786
OGLUM06G07170 Oryza glumaepatula OGLUM06G07170 I 0.786
ONIVA06G08110 Oryza nivara ONIVA06G08110 I 0.786
ORGLA06G0063300 Oryza glaberrima ORGLA06G0063300 I 0.786
ORUFI06G07050 Oryza rufipogon ORUFI06G07050 I 0.786
OS06G0207600 Oryza sativa OS06G0207600 I 0.786
OMERI06G07980 Oryza meridionalis OMERI06G07980 I 0.780
GRMZM2G033915 Zea mays GRMZM2G033915 I 0.767
MLOC_17575 Hordeum vulgare MLOC_17575 I 0.767
OB06G16230 Oryza brachyantha OB06G16230 I 0.767
OPUNC06G06450 Oryza punctata OPUNC06G06450 I 0.767
mgf007626m Mimulus guttatus mgf007626m I 0.767
Lus10021062.g Linum usitatissimum Lus10021062.g I 0.762
Lus10004164.g Linum usitatissimum Lus10004164.g I 0.756
GRMZM2G165991 Zea mays GRMZM2G165991 I 0.732
AMTR_s00024p00159910 Amborella trichopoda AMTR_s00024p00159910 I 0.721