CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

OB01G32850 *(Oryza brachyantha)* WRKY
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF03106 (WRKY)	IPR003657	OB01G32850	T353347_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
WRKY8 M02564_2.00	Arabidopsis thaliana	NRGTCAAHN	NDTTGACYN	PBM Weirauch et al.(2014) pTH7554	0.871	0.862
WRKY28 M07406_2.00	Arabidopsis thaliana	HAAAGTCAAMNNH	DNNKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY28_col_a	0.871	0.862
WRKY28 M07407_2.00	Arabidopsis thaliana	VAAAGTCAAMG	CKTTGACTTTB	Dap-seq OMalley et al.(2016) WRKY28_colamp_a	0.871	0.862
WRKY8 M07428_2.00	Arabidopsis thaliana	NAAAAGTCAACRNHW	WDNYGTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY8_colamp_a	0.871	0.862
WRKY8 M07429_2.00	Arabidopsis thaliana	NNVAAAGTCAACRNH	DNYGTTGACTTTBNN	Dap-seq OMalley et al.(2016) WRKY8_col	0.871	0.862
WRKY48 M02565_2.00	Arabidopsis thaliana	NNVGTCADNN	NNHTGACBNN	PBM Weirauch et al.(2014) pTH7552	0.869	0.845
WRKY71 M07374_2.00	Arabidopsis thaliana	HAAAGTCAAMN	NKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY71_col_a	0.868	0.862
WRKY23 M02556_2.00	Arabidopsis thaliana	RGTCAACG	CGTTGACY	PBM Weirauch et al.(2014) pTH7387	0.865	0.845
WRKY23 M01089_2.00	Arabidopsis thaliana	NRGTCAAM	KTTGACYN	PBM Sullivan et al.(2014) pTH7671	0.865	0.845
WRKY57 M02547_2.00	Arabidopsis thaliana	NNRGTCAAHN	NDTTGACYNN	PBM Weirauch et al.(2014) pTH7917	0.864	0.810
ZAP1 M00982_2.00	Arabidopsis thaliana	NRGTCAAN	NTTGACYN	PBM Lindemose et al.(2014) WRKY1	0.856	0.690
WRKY17 M02550_2.00	Arabidopsis thaliana	NNDGTCAAHN	NDTTGACHNN	PBM Weirauch et al.(2014) pTH8088	0.831	0.534
WRKY17 M07385_2.00	Arabidopsis thaliana	NHAAAGTCAACRNN	NNYGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY17_col_a	0.831	0.534
WRKY17 M07386_2.00	Arabidopsis thaliana	NMAAAGTCAACGN	NCGTTGACTTTKN	Dap-seq OMalley et al.(2016) WRKY17_colamp_a	0.831	0.534
WRKY11 M02559_2.00	Arabidopsis thaliana	NDGTCAAHNN	NNDTTGACHN	PBM Weirauch et al.(2014) pTH8091	0.827	0.534
WRKY11 M07415_2.00	Arabidopsis thaliana	NHAAAGTCAACBNH	DNVGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY11_col_a	0.827	0.534
WRKY11 M11464_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY11_Q2	0.827	0.534
WRKY45 M00899_2.00	Arabidopsis thaliana	NNRGTCAAMGN	NCKTTGACYNN	PBM Franco-Zorrilla et al.(2014) WRKY45	0.827	0.638
WRKY45 M07397_2.00	Arabidopsis thaliana	NAAAAGTCAAMD	HKTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY45_col_a	0.827	0.638
WRKY45 M07398_2.00	Arabidopsis thaliana	MAAAGTCAAMV	BKTTGACTTTK	Dap-seq OMalley et al.(2016) WRKY45_colamp_a	0.827	0.638
WRKY27 M02566_2.00	Arabidopsis thaliana	NNGTCHDNN	NNHDGACNN	PBM Weirauch et al.(2014) pTH8188	0.826	0.552
WRKY27 M07430_2.00	Arabidopsis thaliana	MAAAGTCAACKNH	DNMGTTGACTTTK	Dap-seq OMalley et al.(2016) WRKY27_col_a	0.826	0.552
WRKY27 M07431_2.00	Arabidopsis thaliana	HAAAGTCAACKNH	DNMGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY27_colamp_a	0.826	0.552
WRKY65 M07372_2.00	Arabidopsis thaliana	NWWAGTCAACG	CGTTGACTWWN	Dap-seq OMalley et al.(2016) WRKY65_col_a	0.824	0.500
WRKY65 M07373_2.00	Arabidopsis thaliana	NAAAGTCAACGN	NCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY65_colamp_a	0.824	0.500
WRKY22 M02557_2.00	Arabidopsis thaliana	NNNKTMHDNN	NNHDKAMNNN	PBM Weirauch et al.(2014) pTH7320	0.823	0.517
WRKY22 M07400_2.00	Arabidopsis thaliana	AAAAGTCAACKNH	DNMGTTGACTTTT	Dap-seq OMalley et al.(2016) WRKY22_colamp_a	0.823	0.517
WRKY22 M07401_2.00	Arabidopsis thaliana	NAAAGTCAACKNH	DNMGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY22_col	0.823	0.517
WRKY21 M02553_2.00	Arabidopsis thaliana	NNRGTCAAMN	NKTTGACYNN	PBM Weirauch et al.(2014) pTH7422	0.823	0.517
WRKY21 M07389_2.00	Arabidopsis thaliana	HAAAGTCAACNNH	DNNGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY21_colamp_a	0.823	0.517
WRKY21 M07390_2.00	Arabidopsis thaliana	HAAAGTCAACK	MGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY21_col	0.823	0.517
WRKY50 M07424_2.00	Arabidopsis thaliana	NNAAAAGTCAAMN	NKTTGACTTTTNN	Dap-seq OMalley et al.(2016) WRKY50_col_a	0.822	0.638
WRKY50 M07425_2.00	Arabidopsis thaliana	NWAAGTCAANN	NNTTGACTTWN	Dap-seq OMalley et al.(2016) WRKY50_colamp_a	0.822	0.638
WRKY75 M02562_2.00	Arabidopsis thaliana	NRGTCAAM	KTTGACYN	PBM Weirauch et al.(2014) pTH8821	0.821	0.638
WRKY75 M07420_2.00	Arabidopsis thaliana	NAAAGTCAACGNH	DNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY75_col_a	0.821	0.638
WRKY75 M07421_2.00	Arabidopsis thaliana	VAAAGTCAACRNH	DNYGTTGACTTTB	Dap-seq OMalley et al.(2016) WRKY75_colamp_a	0.821	0.638
WRKY12 M00898_2.00	Arabidopsis thaliana	NHGGTCAACNN	NNGTTGACCDN	PBM Franco-Zorrilla et al.(2014) WRKY12	0.821	0.672
WRKY43 M02555_2.00	Arabidopsis thaliana	NRGTCAAHNN	NNDTTGACYN	PBM Weirauch et al.(2014) pTH7373	0.820	0.655
WRKY43 M07393_2.00	Arabidopsis thaliana	NNAAAGTCAACGNN	NNCGTTGACTTTNN	Dap-seq OMalley et al.(2016) WRKY43_col_a	0.820	0.655
WRKY43 M07394_2.00	Arabidopsis thaliana	NNNNAAAGTCAACGN	NCGTTGACTTTNNNN	Dap-seq OMalley et al.(2016) WRKY43_colamp_a	0.820	0.655
WRKY14 M00731_2.00	Arabidopsis thaliana	NRGTCAAMNN	NNKTTGACYN	PBM Chang et al.(2013) pTH7570	0.819	0.483
WRKY14 M07375_2.00	Arabidopsis thaliana	NAAAGTCAACGNN	NNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY14_col_a	0.819	0.483
WRKY14 M07376_2.00	Arabidopsis thaliana	NAAAGTCAACGNH	DNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY14_colamp_a	0.819	0.483
WRKY29 M02558_2.00	Arabidopsis thaliana	NNNGTCHDNN	NNHDGACNNN	PBM Weirauch et al.(2014) pTH9604	0.818	0.500
WRKY29 M07410_2.00	Arabidopsis thaliana	HAAAGTCAACK	MGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY29_col_a	0.818	0.500
WRKY29 M07411_2.00	Arabidopsis thaliana	HWWAGTCAAMDNN	NNHKTTGACTWWD	Dap-seq OMalley et al.(2016) WRKY29_colamp_a	0.818	0.500
Q40828_PETCR M11467_2.00	Petroselinum crispum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY_Q2	0.818	0.500
WRKY15 M02549_2.00	Arabidopsis thaliana	NRGTCAAMNN	NNKTTGACYN	PBM Weirauch et al.(2014) pTH7602	0.817	0.517
WRKY15 M07383_2.00	Arabidopsis thaliana	AAAAGTCAACKN	NMGTTGACTTTT	Dap-seq OMalley et al.(2016) WRKY15_colamp_a	0.817	0.517
WRKY15 M07384_2.00	Arabidopsis thaliana	NWAAGTCAACB	VGTTGACTTWN	Dap-seq OMalley et al.(2016) WRKY15_col_b	0.817	0.517
PK25870.1 M01325_2.00	Cannabis sativa	NRGTCAAM	KTTGACYN	PBM Lambert et al.(2019) pTH10156	0.815	0.603
WRKY24 M07426_2.00	Arabidopsis thaliana	NNNAWAGTCAACGN	NCGTTGACTWTNNN	Dap-seq OMalley et al.(2016) WRKY24_col_a	0.814	0.621
WRKY24 M07427_2.00	Arabidopsis thaliana	NAWAGTCAACGNH	DNCGTTGACTWTN	Dap-seq OMalley et al.(2016) WRKY24_colamp_a	0.814	0.621
WRKY40 M02548_2.00	Arabidopsis thaliana	NRGTCAWN	NWTGACYN	PBM Weirauch et al.(2014) pTH8398	0.810	0.517
WRKY40 M07379_2.00	Arabidopsis thaliana	NNNAAAGTCAAVR	YBTTGACTTTNNN	Dap-seq OMalley et al.(2016) WRKY40_colamp_a	0.810	0.517
WRKY40 M07380_2.00	Arabidopsis thaliana	NNVAAAGTCAAVRNH	DNYBTTGACTTTBNN	Dap-seq OMalley et al.(2016) WRKY40_col	0.810	0.517
WRKY40 M08180_2.00	Arabidopsis thaliana	NNAGTCAANN	NNTTGACTNN	ChIP-seq Mathelier et al.(2014) MA1085.2	0.810	0.517
WRKY7 M07412_2.00	Arabidopsis thaliana	NNDDDNNNNMAAAGTCAACGV	BCGTTGACTTTKNNNNHHHNN	Dap-seq OMalley et al.(2016) WRKY7_colamp_a	0.809	0.483
WRKY7 M07413_2.00	Arabidopsis thaliana	NAAAAGTCAACKNN	NNMGTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY7_col	0.809	0.483
For this family, TFs with SR scores > 0.808* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
OB01G32850.1	WRKY	200	257	EDGYRWRKSGQKAVKNSPYPRSYYRCTTPKCGVKKRVERSYQDPSTVITTYEGQHTHH

Links
Other WRKY family TFs
Other *Oryza brachyantha* TFs

2350 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
Aan_R012729	Calypte anna	Aan_R012729	I
Afo_R015662	Aptenodytes forsteri	Afo_R015662	I
Brh_R011794	Buceros rhinoceros	Brh_R011794	I
ENSAMEG00000008882	Ailuropoda melanoleuca	ENSAMEG00000008882	I
ENSAMXG00000003341	Astyanax mexicanus	ENSAMXG00000003341	I
ENSAPLG00000013878	Anas platyrhynchos	ENSAPLG00000013878	I
ENSBTAP00000027016-D1	Bos grunniens	ENSBTAP00000027016-D1	I
ENSCSAG00000004049	Chlorocebus sabaeus	ENSCSAG00000004049	I
ENSFALG00000008136	Ficedula albicollis	ENSFALG00000008136	I
ENSLACG00000002751	Latimeria chalumnae	ENSLACG00000002751	I
ENSLOCG00000012080	Lepisosteus oculatus	ENSLOCG00000012080	I
ENSMEUG00000001334	Macropus eugenii	ENSMEUG00000001334	I
ENSMPUG00000009413	Mustela putorius furo	ENSMPUG00000009413	I
ENSNLEG00000013325	Nomascus leucogenys	ENSNLEG00000013325	I
ENSOANG00000028755	Ornithorhynchus anatinus	ENSOANG00000028755	I
ENSOARG00000012718	Ovis aries	ENSOARG00000012718	I
ENSP00000226574	Macaca fascicularis	ENSP00000226574	I
ENSPANG00000023882	Papio anubis	ENSPANG00000023882	I
ENSPPYG00000014965	Pongo abelii	ENSPPYG00000014965	I
ENSPSIG00000008515	Pelodiscus sinensis	ENSPSIG00000008515	I
ENSSHAG00000007374	Sarcophilus harrisii	ENSSHAG00000007374	I
ENSSTOG00000011445	Ictidomys tridecemlineatus	ENSSTOG00000011445	I
Gfo_R000994	Geospiza fortis	Gfo_R000994	I
Myotis_brandtii_NFKB1_10013135	Myotis brandtii	Myotis_brandtii_NFKB1_10013135	I
NFKB1	Tursiops truncatus	ENSTTRG00000010852	I
NFKB1	Pan troglodytes	ENSPTRG00000016320	I
NFKB1	Pteropus vampyrus	ENSPVAG00000002722	I
Nfkb1	Rattus norvegicus	ENSRNOG00000023258	I
NFKB1	Tupaia belangeri	ENSTBEG00000003520	I
NFKB1	Taeniopygia guttata	ENSTGUG00000003595	I
NFKB1	Gallus gallus	ENSGALG00000012304	I
NFKB1	Vicugna pacos	ENSVPAG00000000280	I
NFKB1	Cavia porcellus	ENSCPOG00000007789	I
NFKB1	Callithrix jacchus	ENSCJAG00000015382	I
NFKB1	Canis familiaris	ENSCAFG00000010730	I
NFKB1	Bos taurus	ENSBTAG00000020270	I
nfkb1	Xenopus tropicalis	XB-GENE-985746	I
NFKB1	Ochotona princeps	ENSOPRG00000005212	I
NFKB1	Gorilla gorilla	ENSGGOG00000009071	I
NFKB1	Loxodonta africana	ENSLAFG00000009344	I
NFKB1	Homo sapiens	ENSG00000109320	D
NFKB1	Felis catus	ENSFCAG00000007557	I
NFKB1	Meleagris gallopavo	ENSMGAG00000011299	I
NFKB1	Myotis lucifugus	ENSMLUG00000005986	I
NFKB1	Macaca mulatta	ENSMMUG00000003736	I
NFKB1	Monodelphis domestica	ENSMODG00000020672	I
NFKB1	Equus caballus	ENSECAG00000015042	I
Nfkb1	Mus musculus	ENSMUSG00000028163	D
Nfkb1	Dipodomys ordii	ENSDORG00000007447	I
NFKB1	Dasypus novemcinctus	ENSDNOG00000006855	I
nfkb1	Danio rerio	ENSDARG00000105261	I
NFKB1	Oryctolagus cuniculus	ENSOCUG00000021712	I
NFKB1	Otolemur garnettii	ENSOGAG00000012840	I
NFKB1	Procavia capensis	ENSPCAG00000008172	I
nfkb1.L	Xenopus laevis	XB-GENE-985749	I
Ogr10707	Ophisaurus gracilis	Ogr10707	I
Pvit_05196	Pogona vitticeps	Pvit_05196	I
Tal_R004861	Tyto alba	Tal_R004861	I

OB01G32850 (Oryza brachyantha) WRKY

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

2350 Related TFs

OB01G32850 **(Oryza brachyantha)
WRKY**