POPTR_0013s09460 (Populus trichocarpa)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 POPTR_0013s09460 T354393_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY55
M07392_2.00 		Arabidopsis thaliana
HWAGTCAACGNH
DNCGTTGACTWD		 Dap-seq
OMalley et al.(2016)
WRKY55_col_a 		0.871 0.814
WRKY53
M01090_2.00 		Arabidopsis thaliana
RGTCAACNN
NNGTTGACY		 PBM
Sullivan et al.(2014)
pTH8245 		0.831 0.661
WRKY30
M02563_2.00 		Arabidopsis thaliana
RGTCAACNNN
NNNGTTGACY		 PBM
Weirauch et al.(2014)
pTH7611 		0.825 0.610
WRKY30
M07422_2.00 		Arabidopsis thaliana
DAAGTCAACGN
NCGTTGACTTH		 Dap-seq
OMalley et al.(2016)
WRKY30_col_a 		0.825 0.610
WRKY30
M07423_2.00 		Arabidopsis thaliana
NNAAGTCAACGNH
DNCGTTGACTTNN		 Dap-seq
OMalley et al.(2016)
WRKY30_colamp_a 		0.825 0.610
WRKY70
M07399_2.00 		Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY70_col 		0.825 0.576
WRKY62
M02561_2.00 		Arabidopsis thaliana
TRGTCAAM
KTTGACYA		 PBM
Weirauch et al.(2014)
pTH8246 		0.816 0.492
WRKY46
M07395_2.00 		Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB		 Dap-seq
OMalley et al.(2016)
WRKY46_col_a 		0.814 0.678
WRKY46
M07396_2.00 		Arabidopsis thaliana
HRAAGTCAACG
CGTTGACTTYD		 Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a 		0.814 0.678
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0013s09460.1 WRKY 173 233

Links

Other WRKY family TFs
Other Populus trichocarpa TFs

509 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL002763 Aedes aegypti AAEL002763 N
AAEL015495 Aedes aegypti AAEL015495 N
AALB008259 Anopheles albimanus AALB008259 N
AATE004258 Anopheles atroparvus AATE004258 N
ACEP11966 Atta cephalotes ACEP11966 N
ACUA027622 Anopheles culicifacies ACUA027622 N
ADAC004189 Anopheles darlingi ADAC004189 N
AFAF016561 Anopheles farauti AFAF016561 N
AFUN003758 Anopheles funestus AFUN003758 N
AGAP002083 Anopheles gambiae AGAP002083 I
AMAM023802 Anopheles maculatus AMAM023802 N
AMEC016152 Anopheles melas AMEC016152 N
AMEM001627 Anopheles merus AMEM001627 N
ASIS002621 Anopheles sinensis ASIS002621 N
Cflo_10706--XP_392003.1_APIME Camponotus floridanus Cflo_10706--XP_392003.1_APIME N
CLEC008150 Cimex lectularius CLEC008150 N
CPIJ020207 Culex quinquefasciatus CPIJ020207 N
CpipJ_CPIJ020207 Culex pipiens CpipJ_CPIJ020207 N
DAPPUDRAFT_104384 Daphnia pulex DAPPUDRAFT_104384 N
GA26220 Drosophila pseudoobscura FBgn0247595 I
GB54118 Apis mellifera GB54118 N
GF17309 Drosophila ananassae FBgn0094327 N
GH19280 Drosophila grimshawi FBgn0126746 N
GI23490 Drosophila mojavensis FBgn0146216 N
GJ10241 Drosophila virilis FBgn0197528 N
GK11085 Drosophila willistoni FBgn0213096 N
GM10491 Drosophila sechellia FBgn0165439 N
L798_13150 Zootermopsis nevadensis L798_13150 N
LLOJ002296 Lutzomyia longipalpis LLOJ002296 N
NV18441 Nasonia vitripennis NV18441 N
rn Drosophila melanogaster FBgn0267337 D
RPRC000740 Rhodnius prolixus RPRC000740 N
SINV21632 Solenopsis invicta SINV21632 N
TC016018 Tribolium castaneum TC016018 N
YQE_06536 Dendroctonus ponderosae YQE_06536 N