CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AGAP002083
(
Anopheles gambiae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
AGAP002083
T080359_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
rn
M03712_2.00
Drosophila melanogaster
BTTTTTWHV
BDWAAAAAV
SELEX
Nitta et al.(2015)
rn_1
0.782
0.942
rn
M06180_2.00
Drosophila melanogaster
GBNHTBDSNNBNTTTTTTTKSDHHB
VDDHSMAAAAAAANVNNSHVADNVC
B1H
Zhu et al.(2011)
rn_SANGER_10_FBgn0259172
0.782
0.942
rn
M06181_2.00
Drosophila melanogaster
NNNNBNNNNNNNDTTTTTTVNNNNB
VNNNNBAAAAAAHNNNNNNNVNNNN
B1H
Zhu et al.(2011)
rn_SOLEXA_5_FBgn0259172
0.782
0.942
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AGAP002083-PA
C2H2 ZF
524
546
YQCKMCPQIFTSKADLQLHTQIH
AGAP002083-PA
C2H2 ZF
553
575
YKCSQCNKAFANSSYLSQHTRIH
AGAP002083-PA
C2H2 ZF
581
603
YRCEICQRKFTQLSHLQQHIRTH
AGAP002083-PA
C2H2 ZF
609
633
YKCRHSGCLKAFSQLSNLQSHSRCH
AGAP002083-PA
C2H2 ZF
639
661
YKCNSCYKCFADEPALLEHIPKH
AGAP002083-PA
C2H2 ZF
670
692
HICQYCGKSYTQETYLSKHMQKH
AGAP002083-PB
C2H2 ZF
325
347
YKCSQCNKAFANSSYLSQHTRIH
AGAP002083-PB
C2H2 ZF
353
375
YRCEICQRKFTQLSHLQQHIRTH
AGAP002083-PB
C2H2 ZF
381
405
YKCRHSGCLKAFSQLSNLQSHSRCH
AGAP002083-PB
C2H2 ZF
411
433
YKCNSCYKCFADEPALLEHIPKH
AGAP002083-PB
C2H2 ZF
442
464
HICQYCGKSYTQETYLSKHMQKH
Links
Other
C2H2 ZF
family TFs
Other
Anopheles gambiae
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMEC016152
Anopheles melas
AMEC016152
N
0.827
AMEM001627
Anopheles merus
AMEM001627
N
0.827
AMEC018985
Anopheles melas
AMEC018985
N
0.827
AMAM023802
Anopheles maculatus
AMAM023802
N
0.783
AFAF016561
Anopheles farauti
AFAF016561
N
0.783
ACUA027622
Anopheles culicifacies
ACUA027622
N
0.783
TC016018
Tribolium castaneum
TC016018
N
0.783
AATE004258
Anopheles atroparvus
AATE004258
N
0.783
CpipJ_CPIJ020207
Culex pipiens
CpipJ_CPIJ020207
N
0.783
AFUN003758
Anopheles funestus
AFUN003758
N
0.783
ASIS002621
Anopheles sinensis
ASIS002621
N
0.783
LLOJ002296
Lutzomyia longipalpis
LLOJ002296
N
0.783
CPIJ020207
Culex quinquefasciatus
CPIJ020207
N
0.783
AAEL015495
Aedes aegypti
AAEL015495
N
0.783
AAEL002763
Aedes aegypti
AAEL002763
N
0.783
rn
Drosophila melanogaster
FBgn0267337
D
0.782
GA26220
Drosophila pseudoobscura
FBgn0247595
I
0.782
GG25249
Drosophila erecta
FBgn0117371
I
0.782
GD19488
Drosophila simulans
FBgn0190985
I
0.782
GE25797
Drosophila yakuba
FBgn0242852
I
0.782
L798_13150
Zootermopsis nevadensis
L798_13150
N
0.775
YQE_06536
Dendroctonus ponderosae
YQE_06536
N
0.775
CLEC008150
Cimex lectularius
CLEC008150
N
0.773
Cflo_10706--XP_392003.1_APIME
Camponotus floridanus
Cflo_10706--XP_392003.1_APIME
N
0.773
GB54118
Apis mellifera
GB54118
N
0.773
SINV21632
Solenopsis invicta
SINV21632
N
0.773
GH19280
Drosophila grimshawi
FBgn0126746
N
0.773
GF17309
Drosophila ananassae
FBgn0094327
N
0.773
ACEP11966
Atta cephalotes
ACEP11966
N
0.773
GJ10241
Drosophila virilis
FBgn0197528
N
0.773
GM10491
Drosophila sechellia
FBgn0165439
N
0.773
GK11085
Drosophila willistoni
FBgn0213096
N
0.773
NV18441
Nasonia vitripennis
NV18441
N
0.773
RPRC000740
Rhodnius prolixus
RPRC000740
N
0.773
ADAC004189
Anopheles darlingi
ADAC004189
N
0.769
AALB008259
Anopheles albimanus
AALB008259
N
0.769
GI23490
Drosophila mojavensis
FBgn0146216
N
0.769
DAPPUDRAFT_104384
Daphnia pulex
DAPPUDRAFT_104384
N
0.763