Pavir.J18104 (Panicum virgatum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Pavir.J18104 T356839_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY17
M02550_2.00 		Arabidopsis thaliana
NNDGTCAAHN
NDTTGACHNN		 PBM
Weirauch et al.(2014)
pTH8088 		0.804 1.000
WRKY11
M02559_2.00 		Arabidopsis thaliana
NDGTCAAHNN
NNDTTGACHN		 PBM
Weirauch et al.(2014)
pTH8091 		0.804 1.000
WRKY11
M07415_2.00 		Arabidopsis thaliana
NHAAAGTCAACBNH
DNVGTTGACTTTDN		 Dap-seq
OMalley et al.(2016)
WRKY11_col_a 		0.804 1.000
WRKY17
M07385_2.00 		Arabidopsis thaliana
NHAAAGTCAACRNN
NNYGTTGACTTTDN		 Dap-seq
OMalley et al.(2016)
WRKY17_col_a 		0.804 1.000
WRKY17
M07386_2.00 		Arabidopsis thaliana
NMAAAGTCAACGN
NCGTTGACTTTKN		 Dap-seq
OMalley et al.(2016)
WRKY17_colamp_a 		0.804 1.000
WRKY11
M11464_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRKY11_Q2 		0.804 1.000
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J18104.1.p WRKY 290 310

Links

Other WRKY family TFs
Other Panicum virgatum TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Brh_R001450 Buceros rhinoceros Brh_R001450 I 0.000
ENSCAFG00000009797 Canis familiaris ENSCAFG00000009797 I 0.000
ENSCSAG00000012146 Chlorocebus sabaeus ENSCSAG00000012146 I 0.000
ENSGALG00000025974 Gallus gallus ENSGALG00000025974 I 0.000
ENSMPUG00000012539 Mustela putorius furo ENSMPUG00000012539 I 0.000
ENSNLEG00000006726 Nomascus leucogenys ENSNLEG00000006726 I 0.000
ENSOANG00000031223 Ornithorhynchus anatinus ENSOANG00000031223 I 0.000
ENSOARG00000013903 Ovis aries ENSOARG00000013903 I 0.000
ENSP00000351255-D1 Bos grunniens ENSP00000351255-D1 I 0.000
ENSPANG00000022795 Papio anubis ENSPANG00000022795 I 0.000
ENSPPYG00000013028 Pongo abelii ENSPPYG00000013028 I 0.000
ENSPSIG00000010185 Pelodiscus sinensis ENSPSIG00000010185 I 0.000
Stat1 Rattus norvegicus ENSRNOG00000014079 I 0.000
STAT1 Bos taurus ENSBTAG00000007867 I 0.000
STAT4 Tursiops truncatus ENSTTRG00000001136 I 0.000
STAT4 Sus scrofa ENSSSCG00000016059 I 0.000
STAT4 Pteropus vampyrus ENSPVAG00000004736 I 0.000
Stat4 Mus musculus ENSMUSG00000062939 D 0.000
STAT4 Ochotona princeps ENSOPRG00000008636 I 0.000
STAT4 Otolemur garnettii ENSOGAG00000003042 I 0.000
STAT4 Oryctolagus cuniculus ENSOCUG00000002466 I 0.000
STAT4 Monodelphis domestica ENSMODG00000011767 I 0.000
STAT4 Macaca mulatta ENSMMUG00000005617 I 0.000
STAT4 Meleagris gallopavo ENSMGAG00000016413 I 0.000
STAT4 Loxodonta africana ENSLAFG00000012299 I 0.000
STAT4 Homo sapiens ENSG00000138378 D 0.000
STAT4 Felis catus ENSFCAG00000018634 I 0.000
STAT4 Erinaceus europaeus ENSEEUG00000002778 I 0.000
STAT4 Equus caballus ENSECAG00000023170 I 0.000
Stat4 Dipodomys ordii ENSDORG00000011535 I 0.000
STAT4 Callithrix jacchus ENSCJAG00000005895 I 0.000
STAT4 Choloepus hoffmanni ENSCHOG00000006838 I 0.000
Tal_R001379 Tyto alba Tal_R001379 I 0.000