CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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A1O5_00713
(
Cladophialophora psammophila
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
A1O5_00713
T358499_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
aod-5
M02602_2.00
Neurospora crassa
NNCGGRDNNN
NNNHYCCGNN
PBM
Weirauch et al.(2014)
pTH8816
0.683
0.974
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EXJ76205
Zinc cluster
63
103
RACYACQRAHLTCGDERPCQRCIKRGLQDACQDGVRKKAKY
Links
Other
Zinc cluster
family TFs
Other
Cladophialophora psammophila
TFs
100 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_098180
Albugo laibachii
ALNC14_098180
N
0.000
ALNC14_114790
Albugo laibachii
ALNC14_114790
N
0.000
estExt_fgenesh1_kg.C_260006
Phytophthora capsici
estExt_fgenesh1_kg.C_260006
N
0.000
F443_03220
Phytophthora parasitica
F443_03220
N
0.000
F443_03223
Phytophthora parasitica
F443_03223
N
0.000
fgenesh1_pg.C_scaffold_26000008
Phytophthora capsici
fgenesh1_pg.C_scaffold_26000008
N
0.000
fgenesh_masked-pir_contig_142-abinit-gene-0.47
Pythium irregulare
fgenesh_masked-pir_contig_142-abinit-gene-0.47
N
0.000
fgenesh_scip_prom.28083.12018
Phytophthora lateralis
fgenesh_scip_prom.28083.12018
N
0.000
fgenesh_scip_prom.46568.8839
Phytophthora kernoviae
fgenesh_scip_prom.46568.8839
N
0.000
HpaG811475
Hyaloperonospora arabidopsidis
HpaG811475
N
0.000
maker-pag1_scaffold_151-fgenesh-gene-0.9
Pythium aphanidermatum
maker-pag1_scaffold_151-fgenesh-gene-0.9
N
0.000
maker-par_contig_173-fgenesh-gene-0.4
Pythium arrhenomanes
maker-par_contig_173-fgenesh-gene-0.4
N
0.000
maker-pir_contig_142-fgenesh-gene-0.5
Pythium irregulare
maker-pir_contig_142-fgenesh-gene-0.5
N
0.000
maker-piw_contig_3307-fgenesh-gene-0.0
Pythium iwayamai
maker-piw_contig_3307-fgenesh-gene-0.0
N
0.000
maker-piw_contig_3307-fgenesh-gene-0.1
Pythium iwayamai
maker-piw_contig_3307-fgenesh-gene-0.1
N
0.000
maker-pve_contig_603-fgenesh-gene-0.5
Pythium vexans
maker-pve_contig_603-fgenesh-gene-0.5
N
0.000
maker-pve_contig_603-snap-gene-0.9
Pythium vexans
maker-pve_contig_603-snap-gene-0.9
N
0.000
Phyra73305
Phytophthora ramorum
Phyra73305
N
0.000
Phyra73306
Phytophthora ramorum
Phyra73306
N
0.000
Physo131312
Phytophthora sojae
Physo131312
N
0.000
Physo131313
Phytophthora sojae
Physo131313
N
0.000
PITG_11731
Phytophthora infestans
PITG_11731
N
0.000
PITG_19361
Phytophthora infestans
PITG_19361
N
0.000
PITG_19362
Phytophthora infestans
PITG_19362
N
0.000
PYU1_G003104
Pythium ultimum
PYU1_G003104
N
0.000
PYU1_G003105
Pythium ultimum
PYU1_G003105
N
0.000