COCMIDRAFT_34032 (Bipolaris oryzae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 COCMIDRAFT_34032 T365019_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
aod-5
M02602_2.00 		Neurospora crassa
NNCGGRDNNN
NNNHYCCGNN		 PBM
Weirauch et al.(2014)
pTH8816 		0.565 0.872
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EUC48549 Zinc cluster 62 102

Links

Other Zinc cluster family TFs
Other Bipolaris oryzae TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27996.m000153 Ricinus communis 27996.m000153 N
AMTR_s00009p00173620 Amborella trichopoda AMTR_s00009p00173620 N
cassava27522.m1 Manihot esculenta cassava27522.m1 N
Ca_13608 Cicer arietinum Ca_13608 N
Ca_13610 Cicer arietinum Ca_13610 N
Eucgr.D01630 Eucalyptus grandis Eucgr.D01630 N
evm.TU.supercontig_489.5 Carica papaya evm.TU.supercontig_489.5 N
evm.TU.supercontig_489.6 Carica papaya evm.TU.supercontig_489.6 N
gene18542-v1.0-hybrid Fragaria vesca gene18542-v1.0-hybrid N
GLYMA15G41400 Glycine max GLYMA15G41400 N
GRMZM2G137374 Zea mays GRMZM2G137374 N
MDP0000209483 Malus domestica MDP0000209483 N
MDP0000280921 Malus domestica MDP0000280921 N
mgf020354m Mimulus guttatus mgf020354m N
MTR_1g060700 Medicago truncatula MTR_1g060700 N
MTR_2g067000 Medicago truncatula MTR_2g067000 N
Pavir.Ca01783 Panicum virgatum Pavir.Ca01783 N
Pavir.Ca01784 Panicum virgatum Pavir.Ca01784 N
Pavir.Ia04589 Panicum virgatum Pavir.Ia04589 N
PGSC0003DMG400020812 Solanum tuberosum PGSC0003DMG400020812 N
PGSC0003DMG400044874 Solanum tuberosum PGSC0003DMG400044874 N
POPTR_0001s46530 Populus trichocarpa POPTR_0001s46530 N
POPTR_0011s16100 Populus trichocarpa POPTR_0011s16100 N
SapurV1A.0527s0040 Salix purpurea SapurV1A.0527s0040 N
SapurV1A.0602s0120 Salix purpurea SapurV1A.0602s0120 N
Sb01g048400 Sorghum bicolor Sb01g048400 N
Solyc08g075090.2 Solanum lycopersicum Solyc08g075090.2 N
Solyc08g075110.1 Solanum lycopersicum Solyc08g075110.1 N
TCM_033386 Theobroma cacao TCM_033386 N
VIT_10s0092g00030 Vitis vinifera VIT_10s0092g00030 N