Pavir.Ca01784 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Ca01784 T050712_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ca01784.1.p bHLH 138 185

Links

Other bHLH family TFs
Other Panicum virgatum TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ca01783 Panicum virgatum Pavir.Ca01783 N 0.914
Pavir.Ia04589 Panicum virgatum Pavir.Ia04589 N 0.914
Sb01g048400 Sorghum bicolor Sb01g048400 N 0.901
Si038598m.g Setaria italica Si038598m.g N 0.893
GRMZM2G137374 Zea mays GRMZM2G137374 N 0.890
Pavir.J05526 Panicum virgatum Pavir.J05526 N 0.888
GSMUA_Achr11G16900_001 Musa acuminata GSMUA_Achr11G16900_001 N 0.882
GSMUA_AchrUn_randomG20690_001 Musa acuminata GSMUA_AchrUn_randomG20690_001 N 0.882
BRADI4G29370 Brachypodium distachyon BRADI4G29370 N 0.877
F775_52642 Aegilops tauschii F775_52642 N 0.877
Traes_5BL_B55F708EC Triticum aestivum Traes_5BL_B55F708EC N 0.877
Traes_5DL_84C86F76D Triticum aestivum Traes_5DL_84C86F76D N 0.877
PRUPE_ppa017597mg Prunus persica PRUPE_ppa017597mg N 0.857
Pm010610 Prunus mume Pm010610 N 0.857
Al_scaffold_0004_1965 Arabidopsis lyrata Al_scaffold_0004_1965 N 0.856
BHLH52 Arabidopsis thaliana AT1G30670 N 0.856
BHLH53 Arabidopsis thaliana AT2G34820 N 0.856
Bo3g028090 Brassica oleracea Bo3g028090 N 0.856
Bo4g039270 Brassica oleracea Bo4g039270 N 0.856
Bra005389 Brassica rapa Bra005389 N 0.856
fgenesh1_pm.C_scaffold_1002485 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002485 N 0.856
Bostr.23794s0621 Boechera stricta Bostr.23794s0621 N 0.856
Cagra.1508s0136 Capsella grandiflora Cagra.1508s0136 N 0.856
Carubv10011063m.g Capsella rubella Carubv10011063m.g N 0.856
Pavir.Ib00235 Panicum virgatum Pavir.Ib00235 N 0.856
Thhalv10017751m.g Eutrema salsugineum Thhalv10017751m.g N 0.856
AMTR_s00011p00235740 Amborella trichopoda AMTR_s00011p00235740 N 0.855
Bra022993 Brassica rapa Bra022993 N 0.854
Lus10038432.g Linum usitatissimum Lus10038432.g N 0.848
Ciclev10017579m.g Citrus clementina Ciclev10017579m.g N 0.845
orange1.1g041370m.g Citrus sinensis orange1.1g041370m.g N 0.845
Bostr.15697s0367 Boechera stricta Bostr.15697s0367 N 0.844
Lus10005451.g Linum usitatissimum Lus10005451.g N 0.842