Bra005389 (Brassica rapa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bra005389 T031370_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra005389.1-P bHLH 162 209

Links

Other bHLH family TFs
Other Brassica rapa TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0004_1965 Arabidopsis lyrata Al_scaffold_0004_1965 N 0.914
BHLH53 Arabidopsis thaliana AT2G34820 N 0.914
Bo3g028090 Brassica oleracea Bo3g028090 N 0.914
Bo4g039270 Brassica oleracea Bo4g039270 N 0.914
Bostr.23794s0621 Boechera stricta Bostr.23794s0621 N 0.914
Thhalv10017751m.g Eutrema salsugineum Thhalv10017751m.g N 0.914
Bra022993 Brassica rapa Bra022993 N 0.912
BHLH52 Arabidopsis thaliana AT1G30670 N 0.901
fgenesh1_pm.C_scaffold_1002485 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002485 N 0.901
Cagra.1508s0136 Capsella grandiflora Cagra.1508s0136 N 0.901
Carubv10011063m.g Capsella rubella Carubv10011063m.g N 0.901
Bo4g182930 Brassica oleracea Bo4g182930 N 0.894
Bra021933 Brassica rapa Bra021933 N 0.894
BRADI4G29370 Brachypodium distachyon BRADI4G29370 N 0.893
F775_52642 Aegilops tauschii F775_52642 N 0.893
Traes_5BL_B55F708EC Triticum aestivum Traes_5BL_B55F708EC N 0.893
Traes_5DL_84C86F76D Triticum aestivum Traes_5DL_84C86F76D N 0.893
PRUPE_ppa017597mg Prunus persica PRUPE_ppa017597mg N 0.890
Pm010610 Prunus mume Pm010610 N 0.890
Bostr.15697s0367 Boechera stricta Bostr.15697s0367 N 0.890
Lus10038432.g Linum usitatissimum Lus10038432.g N 0.881
Si038598m.g Setaria italica Si038598m.g N 0.877
Ciclev10017579m.g Citrus clementina Ciclev10017579m.g N 0.877
orange1.1g041370m.g Citrus sinensis orange1.1g041370m.g N 0.877
Lus10005451.g Linum usitatissimum Lus10005451.g N 0.875
OB07G14260 Oryza brachyantha OB07G14260 N 0.869
Sb01g048400 Sorghum bicolor Sb01g048400 N 0.869
GLYMA15G41400 Glycine max GLYMA15G41400 N 0.866
GSMUA_Achr11G16900_001 Musa acuminata GSMUA_Achr11G16900_001 N 0.866
GSMUA_AchrUn_randomG20690_001 Musa acuminata GSMUA_AchrUn_randomG20690_001 N 0.866
Thhalv10009765m.g Eutrema salsugineum Thhalv10009765m.g N 0.866
MTR_1g060700 Medicago truncatula MTR_1g060700 N 0.864
MTR_2g067000 Medicago truncatula MTR_2g067000 N 0.864
gene20146-v1.0-hybrid Fragaria vesca gene20146-v1.0-hybrid N 0.858
GRMZM2G137374 Zea mays GRMZM2G137374 N 0.857
BGIOSGA037431 Oryza indica BGIOSGA037431 N 0.856
OB12G20560 Oryza brachyantha OB12G20560 N 0.856
OGLUM12G14400 Oryza glumaepatula OGLUM12G14400 N 0.856
ONIVA12G13030 Oryza nivara ONIVA12G13030 N 0.856
OPUNC12G11490 Oryza punctata OPUNC12G11490 N 0.856
ORGLA12G0114800 Oryza glaberrima ORGLA12G0114800 N 0.856
ORUFI12G13970 Oryza rufipogon ORUFI12G13970 N 0.856
Pavir.Ca01783 Panicum virgatum Pavir.Ca01783 N 0.856
Pavir.Ca01784 Panicum virgatum Pavir.Ca01784 N 0.856
Pavir.Ia04589 Panicum virgatum Pavir.Ia04589 N 0.856
POPTR_0001s46530 Populus trichocarpa POPTR_0001s46530 N 0.855
POPTR_0011s16100 Populus trichocarpa POPTR_0011s16100 N 0.855
VIT_10s0092g00030 Vitis vinifera VIT_10s0092g00030 N 0.855
cassava27522.m1 Manihot esculenta cassava27522.m1 N 0.855
evm.TU.supercontig_489.5 Carica papaya evm.TU.supercontig_489.5 N 0.855
evm.TU.supercontig_489.6 Carica papaya evm.TU.supercontig_489.6 N 0.855
SapurV1A.0527s0040 Salix purpurea SapurV1A.0527s0040 N 0.855
TCM_033386 Theobroma cacao TCM_033386 N 0.853
Ca_13608 Cicer arietinum Ca_13608 N 0.853
Ca_13610 Cicer arietinum Ca_13610 N 0.853
Eucgr.D01630 Eucalyptus grandis Eucgr.D01630 N 0.853
gene18542-v1.0-hybrid Fragaria vesca gene18542-v1.0-hybrid N 0.853
MDP0000209483 Malus domestica MDP0000209483 N 0.853
MDP0000280921 Malus domestica MDP0000280921 N 0.853
SapurV1A.0602s0120 Salix purpurea SapurV1A.0602s0120 N 0.853
MDP0000791364 Malus domestica MDP0000791364 N 0.846