CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10009765m.g
(
Eutrema salsugineum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Thhalv10009765m.g
T051215_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10009765m
bHLH
139
188
KLSAQSIAARKRRRKITEKTQELGKLIPGNQKHNTAEMFEAAAKYVKFLQ
Links
Other
bHLH
family TFs
Other
Eutrema salsugineum
TFs
57 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA15G41400
Glycine max
GLYMA15G41400
N
0.901
MTR_1g060700
Medicago truncatula
MTR_1g060700
N
0.899
MTR_2g067000
Medicago truncatula
MTR_2g067000
N
0.899
POPTR_0001s46530
Populus trichocarpa
POPTR_0001s46530
N
0.890
POPTR_0011s16100
Populus trichocarpa
POPTR_0011s16100
N
0.890
VIT_10s0092g00030
Vitis vinifera
VIT_10s0092g00030
N
0.890
cassava27522.m1
Manihot esculenta
cassava27522.m1
N
0.890
evm.TU.supercontig_489.5
Carica papaya
evm.TU.supercontig_489.5
N
0.890
evm.TU.supercontig_489.6
Carica papaya
evm.TU.supercontig_489.6
N
0.890
SapurV1A.0527s0040
Salix purpurea
SapurV1A.0527s0040
N
0.890
TCM_033386
Theobroma cacao
TCM_033386
N
0.888
Ca_13608
Cicer arietinum
Ca_13608
N
0.888
Ca_13610
Cicer arietinum
Ca_13610
N
0.888
Eucgr.D01630
Eucalyptus grandis
Eucgr.D01630
N
0.888
gene18542-v1.0-hybrid
Fragaria vesca
gene18542-v1.0-hybrid
N
0.888
MDP0000209483
Malus domestica
MDP0000209483
N
0.888
MDP0000280921
Malus domestica
MDP0000280921
N
0.888
SapurV1A.0602s0120
Salix purpurea
SapurV1A.0602s0120
N
0.888
BHLH52
Arabidopsis thaliana
AT1G30670
N
0.879
fgenesh1_pm.C_scaffold_1002485
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1002485
N
0.879
Cagra.1508s0136
Capsella grandiflora
Cagra.1508s0136
N
0.879
Carubv10011063m.g
Capsella rubella
Carubv10011063m.g
N
0.879
GLYMA08G17747
Glycine max
GLYMA08G17747
N
0.867
Bostr.15697s0367
Boechera stricta
Bostr.15697s0367
N
0.867
Gorai.005G218900
Gossypium raimondii
Gorai.005G218900
N
0.867
Al_scaffold_0004_1965
Arabidopsis lyrata
Al_scaffold_0004_1965
N
0.866
BHLH53
Arabidopsis thaliana
AT2G34820
N
0.866
Bo3g028090
Brassica oleracea
Bo3g028090
N
0.866
Bo4g039270
Brassica oleracea
Bo4g039270
N
0.866
Bra005389
Brassica rapa
Bra005389
N
0.866
27996.m000153
Ricinus communis
27996.m000153
N
0.866
mgf020354m
Mimulus guttatus
mgf020354m
N
0.866
Bostr.23794s0621
Boechera stricta
Bostr.23794s0621
N
0.866
MDP0000216053
Malus domestica
MDP0000216053
N
0.866
Thhalv10017751m.g
Eutrema salsugineum
Thhalv10017751m.g
N
0.866
Bra022993
Brassica rapa
Bra022993
N
0.864
PRUPE_ppa025945mg
Prunus persica
PRUPE_ppa025945mg
N
0.864
TCM_027032
Theobroma cacao
TCM_027032
N
0.857
PRUPE_ppa017597mg
Prunus persica
PRUPE_ppa017597mg
N
0.855
Pm010610
Prunus mume
Pm010610
N
0.855
cassava8426.m1
Manihot esculenta
cassava8426.m1
N
0.853
Bo4g182930
Brassica oleracea
Bo4g182930
N
0.846
Bra021933
Brassica rapa
Bra021933
N
0.846
Cla020055
Citrullus lanatus
Cla020055
N
0.846
Cucsa.167440
Cucumis sativus
Cucsa.167440
N
0.846
Gorai.002G107000
Gossypium raimondii
Gorai.002G107000
N
0.846
Lus10038432.g
Linum usitatissimum
Lus10038432.g
N
0.846
BRADI4G29370
Brachypodium distachyon
BRADI4G29370
N
0.845
F775_52642
Aegilops tauschii
F775_52642
N
0.845
Traes_5BL_B55F708EC
Triticum aestivum
Traes_5BL_B55F708EC
N
0.845
Traes_5DL_84C86F76D
Triticum aestivum
Traes_5DL_84C86F76D
N
0.845
Si038598m.g
Setaria italica
Si038598m.g
N
0.842
Ciclev10017579m.g
Citrus clementina
Ciclev10017579m.g
N
0.842
orange1.1g041370m.g
Citrus sinensis
orange1.1g041370m.g
N
0.842
Lus10005451.g
Linum usitatissimum
Lus10005451.g
N
0.840
Aquca_003_00697
Aquilegia coerulea
Aquca_003_00697
N
0.838
Aquca_020_00213
Aquilegia coerulea
Aquca_020_00213
N
0.838