CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.005G218900
(
Gossypium raimondii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Gorai.005G218900
T049976_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.005G218900.1
bHLH
151
197
VQSIAARERRRKITKKTQELGKLVPGGTKMNTAEMLQAAFKYVKYLQ
Links
Other
bHLH
family TFs
Other
Gossypium raimondii
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA08G17747
Glycine max
GLYMA08G17747
N
0.903
TCM_033386
Theobroma cacao
TCM_033386
N
0.894
Gorai.002G107000
Gossypium raimondii
Gorai.002G107000
N
0.893
VIT_10s0092g00030
Vitis vinifera
VIT_10s0092g00030
N
0.892
MTR_1g060700
Medicago truncatula
MTR_1g060700
N
0.883
MTR_2g067000
Medicago truncatula
MTR_2g067000
N
0.883
Ca_13608
Cicer arietinum
Ca_13608
N
0.883
Ca_13610
Cicer arietinum
Ca_13610
N
0.883
Eucgr.D01630
Eucalyptus grandis
Eucgr.D01630
N
0.883
gene18542-v1.0-hybrid
Fragaria vesca
gene18542-v1.0-hybrid
N
0.883
MDP0000209483
Malus domestica
MDP0000209483
N
0.883
MDP0000280921
Malus domestica
MDP0000280921
N
0.883
SapurV1A.0602s0120
Salix purpurea
SapurV1A.0602s0120
N
0.883
GLYMA15G41400
Glycine max
GLYMA15G41400
N
0.880
POPTR_0001s46530
Populus trichocarpa
POPTR_0001s46530
N
0.880
POPTR_0011s16100
Populus trichocarpa
POPTR_0011s16100
N
0.880
cassava27522.m1
Manihot esculenta
cassava27522.m1
N
0.880
evm.TU.supercontig_489.5
Carica papaya
evm.TU.supercontig_489.5
N
0.880
evm.TU.supercontig_489.6
Carica papaya
evm.TU.supercontig_489.6
N
0.880
SapurV1A.0527s0040
Salix purpurea
SapurV1A.0527s0040
N
0.880
Cla020055
Citrullus lanatus
Cla020055
N
0.873
Cucsa.167440
Cucumis sativus
Cucsa.167440
N
0.873
TCM_027032
Theobroma cacao
TCM_027032
N
0.868
Thhalv10009765m.g
Eutrema salsugineum
Thhalv10009765m.g
N
0.867
mgf020354m
Mimulus guttatus
mgf020354m
N
0.861
PRUPE_ppa025945mg
Prunus persica
PRUPE_ppa025945mg
N
0.859
27996.m000153
Ricinus communis
27996.m000153
N
0.856
MDP0000216053
Malus domestica
MDP0000216053
N
0.856
PGSC0003DMG400020812
Solanum tuberosum
PGSC0003DMG400020812
N
0.855
PGSC0003DMG400044874
Solanum tuberosum
PGSC0003DMG400044874
N
0.855
cassava8426.m1
Manihot esculenta
cassava8426.m1
N
0.848
PRUPE_ppa017597mg
Prunus persica
PRUPE_ppa017597mg
N
0.845
Pm010610
Prunus mume
Pm010610
N
0.845
Lus10038432.g
Linum usitatissimum
Lus10038432.g
N
0.845
Solyc08g075090.2
Solanum lycopersicum
Solyc08g075090.2
N
0.843
Solyc08g075110.1
Solanum lycopersicum
Solyc08g075110.1
N
0.843