CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ib00235
(
Panicum virgatum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Pavir.Ib00235
T050835_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ib00235.1.p
bHLH
164
211
SVQSAAARQRRKRISEKTAELSRLIPGVHKMNTTEMLEEAACHVKLLQ
Links
Other
bHLH
family TFs
Other
Panicum virgatum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ca01783
Panicum virgatum
Pavir.Ca01783
N
0.856
Pavir.Ca01784
Panicum virgatum
Pavir.Ca01784
N
0.856
Pavir.Ia04589
Panicum virgatum
Pavir.Ia04589
N
0.856
Sb01g048400
Sorghum bicolor
Sb01g048400
N
0.843