PAS_chr2-1_0029 (Komagataella pastoris)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 PAS_chr2-1_0029 T376908_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARG81
M08441_2.00 		Saccharomyces cerevisiae
DTGACTCH
DGAGTCAH		 ChIP-chip
Mathelier et al.(2014)
MA0272.1 		0.566 0.700
ARG81
M08685_2.00 		Saccharomyces cerevisiae
CGGYVKCGG
CCGMBRCCG		 Misc
DeBoer et al.(2011)
YML099C_1506 		0.566 0.700
ARG81
M11484_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ARGRII_01 		0.566 0.700
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CAY68629 Zinc cluster 10 49

Links

Other Zinc cluster family TFs
Other Komagataella pastoris TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
16040_YML099C Saccharomyces mikatae 16040_YML099C I 0.566
17710_YML099C Saccharomyces paradoxus 17710_YML099C I 0.566
18194_YML099C Saccharomyces bayanus 18194_YML099C I 0.567
AACERI_AaceriAAL175W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL175W I 0.566
AGOS_AAL175W Ashbya gossypii AGOS_AAL175W I 0.566
ARG81 Saccharomyces cerevisiae YML099C D 0.566
Ecym_8159 Eremothecium cymbalariae Ecym_8159 I 0.566
KAFR_0L02130 Kazachstania africana KAFR_0L02130 I 0.550
KLLA0_D10197g Kluyveromyces lactis KLLA0_D10197g I 0.562
KLTH0E16500g Lachancea thermotolerans KLTH0E16500g I 0.566
KLTH0E16500g Kluyveromyces thermotolerans KLTH0E16500g I 0.566
KNAG_0J00210 Kazachstania naganishii KNAG_0J00210 I 0.567
Kwal_9688 Kluyveromyces waltii Kwal_9688 I 0.566
NCAS_0C00220 Naumovozyma castellii NCAS_0C00220 I 0.567
NDAI_0K00150 Naumovozyma dairenensis NDAI_0K00150 I 0.550
SAKL0D00264g Lachancea kluyveri SAKL0D00264g I 0.550
Scas_Contig626.6 Saccharomyces castellii Scas_Contig626.6 I 0.567
SKUD_195006 Saccharomyces kudriavzevii SKUD_195006 I 0.566
SU7_2431 Saccharomyces arboricola SU7_2431 I 0.566
TDEL_0B00480 Torulaspora delbrueckii TDEL_0B00480 I 0.567
XP_002490909.1 Pichia pastoris XP_002490909.1 I 0.683
ZBAI_03002 Zygosaccharomyces bailii ZBAI_03002 I 0.567
ZBAI_08687 Zygosaccharomyces bailii ZBAI_08687 I 0.567
ZYRO0A00440g Zygosaccharomyces rouxii ZYRO0A00440g I 0.567