CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PHACADRAFT_258142
(
Phanerochaete carnosa
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PHACADRAFT_258142
T378340_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EKM54346
Zinc cluster
15
53
RCDHCRVNNLKCDRVLPTCNHCAWANGRECKYTPLPTPA
EKM54346
Zinc cluster
59
97
RCDRCRLKNLKCDRNLPVCNHCAEDKEKECNYTPKKRHK
Links
Other
Zinc cluster
family TFs
Other
Phanerochaete carnosa
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AC206951.3_FG016
Zea mays
AC206951.3_FG016
N
AC206951.3_FG017
Zea mays
AC206951.3_FG017
I
BGIOSGA003364
Oryza indica
BGIOSGA003364
I
BGIOSGA011326
Oryza indica
BGIOSGA011326
I
BGIOSGA012597
Oryza indica
BGIOSGA012597
N
BGIOSGA023726
Oryza indica
BGIOSGA023726
N
BGIOSGA032849
Oryza indica
BGIOSGA032849
I
Bra021594
Brassica rapa
Bra021594
I
BRADI1G72450
Brachypodium distachyon
BRADI1G72450
I
BRADI2G11890
Brachypodium distachyon
BRADI2G11890
I
BRADI5G25570
Brachypodium distachyon
BRADI5G25570
I
cassava22677.valid.m1
Manihot esculenta
cassava22677.valid.m1
I
cassava47179.m1
Manihot esculenta
cassava47179.m1
I
Ca_07754
Cicer arietinum
Ca_07754
I
Ciclev10021622m.g
Citrus clementina
Ciclev10021622m.g
I
Ciclev10024142m.g
Citrus clementina
Ciclev10024142m.g
I
Cucsa.062330
Cucumis sativus
Cucsa.062330
I
evm.TU.supercontig_162.25
Carica papaya
evm.TU.supercontig_162.25
I
e_gw1.60.113.1
Physcomitrella patens
e_gw1.60.113.1
I
GLYMA10G04210
Glycine max
GLYMA10G04210
I
GLYMA13G18410
Glycine max
GLYMA13G18410
I
GLYMA19G43815
Glycine max
GLYMA19G43815
I
Gorai.007G281000
Gossypium raimondii
Gorai.007G281000
I
GRMZM2G025062
Zea mays
GRMZM2G025062
I
GRMZM2G053503
Zea mays
GRMZM2G053503
I
GRMZM2G114820
Zea mays
GRMZM2G114820
I
GRMZM2G148333
Zea mays
GRMZM2G148333
I
GRMZM2G169382
Zea mays
GRMZM2G169382
I
GRMZM2G478965
Zea mays
GRMZM2G478965
I
GSMUA_Achr6G27040_001
Musa acuminata
GSMUA_Achr6G27040_001
I
LjSGA_017232.1
Lotus japonicus
LjSGA_017232.1
I
LPERR03G05410
Leersia perrieri
LPERR03G05410
N
LPERR03G14670
Leersia perrieri
LPERR03G14670
N
Lus10005805.g
Linum usitatissimum
Lus10005805.g
I
Lus10006796.g
Linum usitatissimum
Lus10006796.g
I
Lus10021873.g
Linum usitatissimum
Lus10021873.g
I
MDP0000322279
Malus domestica
MDP0000322279
I
mgf018693m
Mimulus guttatus
mgf018693m
I
MLOC_51143
Hordeum vulgare
MLOC_51143
I
MTR_1g069945
Medicago truncatula
MTR_1g069945
I
OBART03G06100
Oryza barthii
OBART03G06100
I
OBART07G26160
Oryza barthii
OBART07G26160
N
OGLUM03G06090
Oryza glumaepatula
OGLUM03G06090
N
OGLUM03G06100
Oryza glumaepatula
OGLUM03G06100
I
OGLUM03G17210
Oryza glumaepatula
OGLUM03G17210
N
OGLUM07G26170
Oryza glumaepatula
OGLUM07G26170
N
OGLUM10G08400
Oryza glumaepatula
OGLUM10G08400
I
OMERI03G05920
Oryza meridionalis
OMERI03G05920
I
OMERI03G15020
Oryza meridionalis
OMERI03G15020
N
OMERI07G22780
Oryza meridionalis
OMERI07G22780
N
OMERI10G05820
Oryza meridionalis
OMERI10G05820
I
OMERI12G11270
Oryza meridionalis
OMERI12G11270
I
ONIVA03G06100
Oryza nivara
ONIVA03G06100
N
ONIVA03G06110
Oryza nivara
ONIVA03G06110
I
ONIVA03G17860
Oryza nivara
ONIVA03G17860
N
ONIVA07G25780
Oryza nivara
ONIVA07G25780
N
ONIVA10G08250
Oryza nivara
ONIVA10G08250
I
OPUNC01G12900
Oryza punctata
OPUNC01G12900
I
OPUNC03G05900
Oryza punctata
OPUNC03G05900
I
OPUNC03G16250
Oryza punctata
OPUNC03G16250
N
OPUNC07G24590
Oryza punctata
OPUNC07G24590
N
orange1.1g042174m.g
Citrus sinensis
orange1.1g042174m.g
I
orange1.1g047387m.g
Citrus sinensis
orange1.1g047387m.g
I
ORGLA01G0108600
Oryza glaberrima
ORGLA01G0108600
I
ORGLA03G0058800
Oryza glaberrima
ORGLA03G0058800
N
ORGLA03G0058900
Oryza glaberrima
ORGLA03G0058900
I
ORGLA03G0161100
Oryza glaberrima
ORGLA03G0161100
N
ORGLA07G0205000
Oryza glaberrima
ORGLA07G0205000
N
ORGLA10G0072500
Oryza glaberrima
ORGLA10G0072500
I
ORUFI03G05920
Oryza rufipogon
ORUFI03G05920
N
ORUFI03G17430
Oryza rufipogon
ORUFI03G17430
N
ORUFI07G27120
Oryza rufipogon
ORUFI07G27120
N
ORUFI10G09060
Oryza rufipogon
ORUFI10G09060
I
OS01G0313300
Oryza sativa
OS01G0313300
I
OS03G0183300
Oryza sativa
OS03G0183300
I
OS03G0341000
Oryza sativa
OS03G0341000
N
OS07G0674800
Oryza sativa
OS07G0674800
N
OS10G0390800
Oryza sativa
OS10G0390800
I
Pavir.Ba00136
Panicum virgatum
Pavir.Ba00136
I
Pavir.Bb03609
Panicum virgatum
Pavir.Bb03609
I
Pavir.Eb02324
Panicum virgatum
Pavir.Eb02324
I
Pavir.Ia04158
Panicum virgatum
Pavir.Ia04158
I
Pavir.Ib00527
Panicum virgatum
Pavir.Ib00527
N
Pavir.Ib00528
Panicum virgatum
Pavir.Ib00528
I
Pavir.Ib02796
Panicum virgatum
Pavir.Ib02796
I
Pavir.Ib03413
Panicum virgatum
Pavir.Ib03413
I
Pavir.J08480
Panicum virgatum
Pavir.J08480
I
Pavir.J12680
Panicum virgatum
Pavir.J12680
N
POPTR_0002s04020
Populus trichocarpa
POPTR_0002s04020
I
POPTR_0005s24460
Populus trichocarpa
POPTR_0005s24460
I
POPTR_0011s06010
Populus trichocarpa
POPTR_0011s06010
I
POPTR_0013s04240
Populus trichocarpa
POPTR_0013s04240
I
SapurV1A.0006s0850
Salix purpurea
SapurV1A.0006s0850
I
SapurV1A.0233s0360
Salix purpurea
SapurV1A.0233s0360
I
SapurV1A.0233s0370
Salix purpurea
SapurV1A.0233s0370
I
SapurV1A.4312s0010
Salix purpurea
SapurV1A.4312s0010
I
Sb01g045040
Sorghum bicolor
Sb01g045040
I
Sb02g042760
Sorghum bicolor
Sb02g042760
I
Sb03g012890
Sorghum bicolor
Sb03g012890
I
SELMODRAFT_17703
Selaginella moellendorffii
SELMODRAFT_17703
I
SELMODRAFT_73134
Selaginella moellendorffii
SELMODRAFT_73134
I
SELMODRAFT_73164
Selaginella moellendorffii
SELMODRAFT_73164
I
SELMODRAFT_73169
Selaginella moellendorffii
SELMODRAFT_73169
I
Si002845m.g
Setaria italica
Si002845m.g
I
Si031079m.g
Setaria italica
Si031079m.g
I
Si032815m.g
Setaria italica
Si032815m.g
I
Si036118m.g
Setaria italica
Si036118m.g
I
Si036821m.g
Setaria italica
Si036821m.g
N
TCM_026233
Theobroma cacao
TCM_026233
I
TRAES3BF171600010CFD_g
Triticum aestivum
TRAES3BF171600010CFD_g
I
Traes_2AS_72E9B68D2
Triticum aestivum
Traes_2AS_72E9B68D2
I
Traes_2BS_5E7287209
Triticum aestivum
Traes_2BS_5E7287209
I
Traes_4AS_8A64DBE8E
Triticum aestivum
Traes_4AS_8A64DBE8E
I
Traes_4BL_7EC2BFC7B
Triticum aestivum
Traes_4BL_7EC2BFC7B
I
Traes_5BL_98D063967
Triticum aestivum
Traes_5BL_98D063967
I
Traes_5DL_41E3B1B23
Triticum aestivum
Traes_5DL_41E3B1B23
I