CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PVAR5_2965
(
Byssochlamys spectabilis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PVAR5_2965
T382501_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GAD94340
Zinc cluster
27
60
RIRRVKCDEGKPECNRCKSTGRKCDGYALPQSPS
Links
Other
Zinc cluster
family TFs
Other
Byssochlamys spectabilis
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA010816
Oryza indica
BGIOSGA010816
N
BGIOSGA023698
Oryza indica
BGIOSGA023698
N
BRADI1G17440
Brachypodium distachyon
BRADI1G17440
N
F775_15511
Aegilops tauschii
F775_15511
N
GRMZM2G181605
Zea mays
GRMZM2G181605
N
GSMUA_Achr3G18020_001
Musa acuminata
GSMUA_Achr3G18020_001
N
GSMUA_Achr8G21470_001
Musa acuminata
GSMUA_Achr8G21470_001
I
LPERR07G23450
Leersia perrieri
LPERR07G23450
N
MLOC_65400
Hordeum vulgare
MLOC_65400
N
MLOC_65714
Hordeum vulgare
MLOC_65714
N
OB07G32150
Oryza brachyantha
OB07G32150
N
OBART03G15920
Oryza barthii
OBART03G15920
N
OBART07G26650
Oryza barthii
OBART07G26650
N
OGLUM03G16080
Oryza glumaepatula
OGLUM03G16080
N
OGLUM07G26690
Oryza glumaepatula
OGLUM07G26690
N
OLONG_007532
Oryza longistaminata
OLONG_007532
N
OLONG_022063
Oryza longistaminata
OLONG_022063
N
OMERI07G23300
Oryza meridionalis
OMERI07G23300
N
ONIVA03G16900
Oryza nivara
ONIVA03G16900
N
ONIVA07G26420
Oryza nivara
ONIVA07G26420
N
OPUNC07G25090
Oryza punctata
OPUNC07G25090
N
ORGLA03G0152400
Oryza glaberrima
ORGLA03G0152400
N
ORGLA07G0210900
Oryza glaberrima
ORGLA07G0210900
N
ORUFI03G16480
Oryza rufipogon
ORUFI03G16480
N
ORUFI07G27640
Oryza rufipogon
ORUFI07G27640
N
OS03G0327100
Oryza sativa
OS03G0327100
N
OS07G0684800
Oryza sativa
OS07G0684800
N
Pavir.Ba00246
Panicum virgatum
Pavir.Ba00246
N
Pavir.Bb03733
Panicum virgatum
Pavir.Bb03733
N
Sb02g043270
Sorghum bicolor
Sb02g043270
N
Traes_2AS_759EDDA47
Triticum aestivum
Traes_2AS_759EDDA47
N
Traes_2AS_7AAACC26B
Triticum aestivum
Traes_2AS_7AAACC26B
N
Traes_2BS_00566A85C
Triticum aestivum
Traes_2BS_00566A85C
N
Traes_2DS_291916365
Triticum aestivum
Traes_2DS_291916365
N
TRIUR3_20284
Triticum urartu
TRIUR3_20284
N
TRIUR3_24111
Triticum urartu
TRIUR3_24111
N
TRIUR3_24774
Triticum urartu
TRIUR3_24774
N