CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMAC_09321
(
Sordaria macrospora
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
SMAC_09321
T383999_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU08527
M02627_2.00
Neurospora crassa
NKYCGGCGNNN
NNNCGCCGRMN
PBM
Weirauch et al.(2014)
pTH8938
0.645
0.921
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCC14479
Zinc cluster
11
59
LACDRCHSQKLRCPRQDKTTKDTDGSSKPCVRCERAKVPCVFSPRQRRT
Links
Other
Zinc cluster
family TFs
Other
Sordaria macrospora
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh3_pm.C_180042
Neurospora discreta
estExt_fgenesh3_pm.C_180042
I
0.645
MBM_05148
Marssonina brunnea
MBM_05148
I
0.563
NCU08527
Neurospora crassa
NCU08527
D
0.645