VDBG_02744 (Verticillium alfalfae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 VDBG_02744 T387477_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
clr-2
M01429_2.00 		Neurospora crassa
NNNNNCGGAR
YTCCGNNNNN		 PBM
Lambert et al.(2019)
pTH11853 		0.552 0.816
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EEY16635 Zinc cluster 34 73

Links

Other Zinc cluster family TFs
Other Verticillium alfalfae TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
22737_YPR186C Saccharomyces paradoxus 22737_YPR186C I
26175_YPR186C Saccharomyces bayanus 26175_YPR186C I
PZF1 Saccharomyces cerevisiae YPR186C D
SKUD_152903 Saccharomyces kudriavzevii SKUD_152903 I