CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.sca_87_unmapped000011
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pg.sca_87_unmapped000011
T390293_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.sca_87_unmapped000011
Zinc cluster
20
58
QACTNCRARKTRCDAAKPKCSLCVTQNVACVYRDSQQPK
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CFIO01_12043
Colletotrichum fioriniae
CFIO01_12043
N
0.628
Cob_00751
Colletotrichum orbiculare
Cob_00751
N
0.628
fgenesh1_pg.sca_187_unmapped000003
Nectria haematococca
fgenesh1_pg.sca_187_unmapped000003
N
0.562
NechaG89030
Fusarium solani
NechaG89030
N
0.683
NechaG89515
Fusarium solani
NechaG89515
N
0.562
VDBG_03553
Verticillium albo atrum
VDBG_03553
N
0.586
VDBG_03553
Verticillium alfalfae
VDBG_03553
N
0.586