CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_03553
(
Verticillium alfalfae
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
VDBG_03553
T387494_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEY17444
Zinc cluster
353
391
QACTNCRARKTRCDAAKPKCSLCMAQNADCVYKDSNQPR
Links
Other
Zinc cluster
family TFs
Other
Verticillium alfalfae
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_03553
Verticillium albo atrum
VDBG_03553
N
0.683
CFIO01_12043
Colletotrichum fioriniae
CFIO01_12043
N
0.612
Cob_00751
Colletotrichum orbiculare
Cob_00751
N
0.612
NechaG89030
Fusarium solani
NechaG89030
N
0.586
fgenesh1_pg.sca_87_unmapped000011
Nectria haematococca
fgenesh1_pg.sca_87_unmapped000011
N
0.586
NechaG89515
Fusarium solani
NechaG89515
N
0.541
fgenesh1_pg.sca_187_unmapped000003
Nectria haematococca
fgenesh1_pg.sca_187_unmapped000003
N
0.541