CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pm.sca_44_chr3_2_0000059
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pm.sca_44_chr3_2_0000059
T390355_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.sca_44_chr3_2_0000059
Zinc cluster
20
58
RDCRSCKSRGVKCDLNRPRCLPCVQSGLTCGGYPQRVVW
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FGRRES_17430
Fusarium graminearum
FGRRES_17430
N
0.597
FPSE_05701
Fusarium pseudograminearum
FPSE_05701
N
0.589
NechaG91591
Fusarium solani
NechaG91591
N
0.683
PMAA_017320
Talaromyces marneffei
PMAA_017320
N
0.544
PMAA_017320
Penicillium marneffei
PMAA_017320
N
0.544
TRIATDRAFT_129946
Trichoderma atroviride
TRIATDRAFT_129946
N
0.578
TRIVIDRAFT_39606
Trichoderma virens
TRIVIDRAFT_39606
N
0.553
VDAG_03890
Verticillium dahliae
VDAG_03890
N
0.559
VDBG_02982
Verticillium albo atrum
VDBG_02982
N
0.559
VDBG_02982
Verticillium alfalfae
VDBG_02982
N
0.559