fgeneshHS_pg.scaffold_68000014 (Naegleria gruberi)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 fgeneshHS_pg.scaffold_68000014 T390385_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgeneshHS_pg.scaffold_68000014 Zinc cluster 97 123

Links

Other Zinc cluster family TFs
Other Naegleria gruberi TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_022_00282 Aquilegia coerulea Aquca_022_00282 I
BGIOSGA014023 Oryza indica BGIOSGA014023 N
BRADI5G21010 Brachypodium distachyon BRADI5G21010 N
F775_09864 Aegilops tauschii F775_09864 N
GRMZM2G176677 Zea mays GRMZM2G176677 N
GSMUA_Achr11G09000_001 Musa acuminata GSMUA_Achr11G09000_001 N
LPERR04G20380 Leersia perrieri LPERR04G20380 N
LPERR04G26370 Leersia perrieri LPERR04G26370 N
MLOC_36942 Hordeum vulgare MLOC_36942 N
OGLUM04G30770 Oryza glumaepatula OGLUM04G30770 N
OLONG_013985 Oryza longistaminata OLONG_013985 N
OMERI04G25580 Oryza meridionalis OMERI04G25580 N
ONIVA04G10650 Oryza nivara ONIVA04G10650 N
OPUNC04G28460 Oryza punctata OPUNC04G28460 N
ORUFI04G32600 Oryza rufipogon ORUFI04G32600 N
Pavir.J14942 Panicum virgatum Pavir.J14942 N
PDK_20s1369501g001 Phoenix dactylifera PDK_20s1369501g001 N
Sb06g034210 Sorghum bicolor Sb06g034210 N
Si022216m.g Setaria italica Si022216m.g N
Solyc11g005920.1 Solanum lycopersicum Solyc11g005920.1 N
Traes_2AL_DB6FB44F8 Triticum aestivum Traes_2AL_DB6FB44F8 N
Traes_2BL_0BA3C9692 Triticum aestivum Traes_2BL_0BA3C9692 N
Traes_2DL_8F24AEC6D Triticum aestivum Traes_2DL_8F24AEC6D N
TRIUR3_21467 Triticum urartu TRIUR3_21467 N