10288_YHR178W (Saccharomyces mikatae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 10288_YHR178W T390724_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STB5
M00087_2.00 		Saccharomyces cerevisiae
NCGGNNHKWN
NWMDNNCCGN		 PBM
Badis et al.(2008)
STB5_4529 		0.683 1.000
STB5
M00923_2.00 		Saccharomyces cerevisiae
NCGGNNNHWN
NWDNNNCCGN		 PBM
Gordan et al.(2011)
Stb5 		0.683 1.000
STB5
M07514_2.00 		Saccharomyces cerevisiae
CGGNVHTA
TADBNCCG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0392.1 		0.683 1.000
STB5
M08664_2.00 		Saccharomyces cerevisiae
CGGNVHKW
WMDBNCCG		 Misc
DeBoer et al.(2011)
YHR178W_1405 		0.683 1.000
STB5
M08665_2.00 		Saccharomyces cerevisiae
BCNGCGGN
NCCGCNGV		 Misc
DeBoer et al.(2011)
YHR178W_2068 		0.683 1.000
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
10288_YHR178W Zinc cluster 20 58

Links

Other Zinc cluster family TFs
Other Saccharomyces mikatae TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_005700 Acremonium chrysogenum ACRE_005700 N
BBA_07544 Beauveria bassiana BBA_07544 N
CCM_08959 Cordyceps militaris CCM_08959 N
CPUR_06627 Claviceps purpurea CPUR_06627 N
fgenesh1_pm.sca_8_chr1_1_0000139 Nectria haematococca fgenesh1_pm.sca_8_chr1_1_0000139 N
FGRRES_01576 Fusarium graminearum FGRRES_01576 N
FOXG_11128 Fusarium oxysporum FOXG_11128 N
FOXG_12568 Fusarium oxysporum FOXG_12568 N
FOXG_12619 Fusarium oxysporum FOXG_12619 N
FOXG_13972 Fusarium oxysporum FOXG_13972 N
FOXG_17057 Fusarium oxysporum FOXG_17057 N
FPSE_00757 Fusarium pseudograminearum FPSE_00757 N
FVEG_09661 Fusarium verticillioides FVEG_09661 N
MAC_05756 Metarhizium acridum MAC_05756 N
MAJ_06029 Metarhizium majus MAJ_06029 N
MAM_04102 Metarhizium album MAM_04102 N
MANI_007868 Metarhizium anisopliae MANI_007868 N
MBR_06792 Metarhizium brunneum MBR_06792 N
MGU_04574 Metarhizium guizhouense MGU_04574 N
NechaG89702 Fusarium solani NechaG89702 N
OCS_00178 Ophiocordyceps sinensis OCS_00178 N
TRIATDRAFT_167723 Trichoderma atroviride TRIATDRAFT_167723 N
TRIREDRAFT_108357 Trichoderma reesei TRIREDRAFT_108357 N
TRIVIDRAFT_118500 Trichoderma virens TRIVIDRAFT_118500 N
VHEMI05713 Torrubiella hemipterigena VHEMI05713 N