23118_Multiple (Saccharomyces mikatae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 23118_Multiple T390829_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RDS1
M00078_2.00 		Saccharomyces cerevisiae
GCGGCSGD
HCSGCCGC		 PBM
Badis et al.(2008)
RDS1_2068 		0.620 0.769
RDS1
M01573_2.00 		Saccharomyces cerevisiae
NKCGGVNNNN
NNNNBCCGMN		 PBM
Zhu et al.(2009)
Rds1 		0.620 0.769
RDS1
M07505_2.00 		Saccharomyces cerevisiae
CGGCCGV
BCGGCCG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0361.1 		0.620 0.769
RDS1
M08648_2.00 		Saccharomyces cerevisiae
CGGCCGV
BCGGCCG		 Misc
DeBoer et al.(2011)
YCR106W_506 		0.620 0.769
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23118_Multiple Zinc cluster 13 51

Links

Other Zinc cluster family TFs
Other Saccharomyces mikatae TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA000297 Oryza indica BGIOSGA000297 N
LPERR01G35620 Leersia perrieri LPERR01G35620 N
OB01G49780 Oryza brachyantha OB01G49780 N
OB07G14520 Oryza brachyantha OB07G14520 N
OBART01G41060 Oryza barthii OBART01G41060 N
OGLUM01G45230 Oryza glumaepatula OGLUM01G45230 N
OLONG_004132 Oryza longistaminata OLONG_004132 N
OMERI01G38050 Oryza meridionalis OMERI01G38050 N
ONIVA01G46080 Oryza nivara ONIVA01G46080 N
ORGLA01G0349700 Oryza glaberrima ORGLA01G0349700 N
ORUFI01G44370 Oryza rufipogon ORUFI01G44370 N
Si039273m.g Setaria italica Si039273m.g N