23482_Multiple (Saccharomyces mikatae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 23482_Multiple T390832_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ECM22
M00096_2.00 		Saccharomyces cerevisiae
NNCSGRDNHN
NDNHYCSGNN		 PBM
Badis et al.(2008)
ECM22_2066 		0.683 1.000
ECM22
M00924_2.00 		Saccharomyces cerevisiae
NNDWACGRN
NYCGTWHNN		 PBM
Gordan et al.(2011)
Ecm22 		0.683 1.000
ECM22
M01589_2.00 		Saccharomyces cerevisiae
NNNCGGVN
NBCCGNNN		 PBM
Zhu et al.(2009)
Ecm22 		0.683 1.000
ECM22
M07522_2.00 		Saccharomyces cerevisiae
TCCGGAD
HTCCGGA		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0292.1 		0.683 1.000
ECM22
M08679_2.00 		Saccharomyces cerevisiae
NNYCGGRNNDMCGGAVNH
DNBTCCGKHNNYCCGRNN		 Misc
DeBoer et al.(2011)
YLR228C_849 		0.683 1.000
UPC2
M00920_2.00 		Saccharomyces cerevisiae
NTCGTWYVN
NBRWACGAN		 PBM
Gordan et al.(2011)
Upc2 		0.541 0.675
UPC2
M07508_2.00 		Saccharomyces cerevisiae
NRWACGA
TCGTWYN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0411.1 		0.541 0.675
UPC2
M08654_2.00 		Saccharomyces cerevisiae
NRWACGA
TCGTWYN		 Misc
DeBoer et al.(2011)
YDR213W_544 		0.541 0.675
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23482_Multiple Zinc cluster 42 81

Links

Other Zinc cluster family TFs
Other Saccharomyces mikatae TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL017286 Aedes aegypti AAEL017286 I 0.000
AARA010408 Anopheles arabiensis AARA010408 I 0.000
AATE009280 Anopheles atroparvus AATE009280 I 0.000
ACHR007935 Anopheles christyi ACHR007935 I 0.000
ADIR001286 Anopheles dirus ADIR001286 I 0.000
AEPI010843 Anopheles epiroticus AEPI010843 I 0.000
AFAF011056 Anopheles farauti AFAF011056 I 0.000
AFUN006825 Anopheles funestus AFUN006825 I 0.000
AGAP000646 Anopheles gambiae AGAP000646 I 0.000
AMEC005528 Anopheles melas AMEC005528 I 0.000
AMEM010976 Anopheles merus AMEM010976 I 0.000
AMIN005729 Anopheles minimus AMIN005729 I 0.000
AQUA005728 Anopheles quadriannulatus AQUA005728 I 0.000
ASIS006087 Anopheles sinensis ASIS006087 I 0.000
ASTEI06243 Anopheles stephensi ASTEI06243 I 0.000
CPIJ009795 Culex quinquefasciatus CPIJ009795 N 0.000
CpipJ_CPIJ009795 Culex pipiens CpipJ_CPIJ009795 N 0.000
dm Drosophila melanogaster FBgn0262656 D 0.000
GA10565 Drosophila pseudoobscura FBgn0070622 I 0.000
GE16299 Drosophila yakuba FBgn0233833 I 0.000
GF19606 Drosophila ananassae FBgn0096613 I 0.000
GG18655 Drosophila erecta FBgn0110865 I 0.000
GH12538 Drosophila grimshawi FBgn0120017 I 0.000
GI14431 Drosophila mojavensis FBgn0137183 I 0.000
GJ18771 Drosophila virilis FBgn0205922 I 0.000
GK24977 Drosophila willistoni FBgn0226936 I 0.000
GL13122 Drosophila persimilis FBgn0150728 I 0.000
GM19268 Drosophila sechellia FBgn0174168 I 0.000
LCUP000798 Lucilia cuprina LCUP000798 I 0.000
LLOJ001942 Lutzomyia longipalpis LLOJ001942 I 0.000
MDOA009876 Musca domestica MDOA009876 I 0.000
MESCA005088 Megaselia scalaris MESCA005088 I 0.000
PPAI010897 Phlebotomus papatasi PPAI010897 I 0.000