4144_YDR207C (Saccharomyces mikatae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 4144_YDR207C T390849_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
UME6
M00081_2.00 		Saccharomyces cerevisiae
NDHCDHGDHN
NDHCDHGDHN		 PBM
Badis et al.(2008)
UME6_2040 		0.683 1.000
UME6
M01575_2.00 		Saccharomyces cerevisiae
VGCGSNWNN
NNWNSCGCB		 PBM
Zhu et al.(2009)
Ume6 		0.683 1.000
UME6
M08653_2.00 		Saccharomyces cerevisiae
NSGCGGYWV
BWRCCGCSN		 Misc
DeBoer et al.(2011)
YDR207C_511 		0.683 1.000
UME6
M08468_2.00 		Saccharomyces cerevisiae
TSGGCGGCTAWWT
AWWTAGCCGCCSA		 COMPILED
Mathelier et al.(2014)
MA0412.1 		0.683 1.000
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
4144_YDR207C Zinc cluster 785 822

Links

Other Zinc cluster family TFs
Other Saccharomyces mikatae TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALUE_0000733001 Ascaris lumbricoides ALUE_0000733001 N
ASU_07904 Ascaris suum ASU_07904 N
EEL_0000149401 Elaeophora elaphi EEL_0000149401 N
GPUH_0002051601 Gongylonema pulchrum GPUH_0002051601 N
LOAG_07430 Loa loa LOAG_07430 N
nAv.1.0.1.g01358 Acanthocheilonema viteae nAv.1.0.1.g01358 N
nDi.2.2.2.g05474 Dirofilaria immitis nDi.2.2.2.g05474 N
nLs.2.1.2.g02230 Litomosoides sigmodontis nLs.2.1.2.g02230 N
nOo.2.0.1.g04545 Onchocerca ochengi nOo.2.0.1.g04545 N
TCLT_0000866601 Thelazia callipaeda TCLT_0000866601 N
WBGene00245755 Onchocerca volvulus WBGene00245755 N