CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
AB05458.1
(
Alternaria brassicicola
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
AB05458.1
T390932_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_09395
M01339_2.00
Aspergillus nidulans
NNNNNNNHDN
NHDNNNNNNN
PBM
Lambert et al.(2019)
pEX0383
0.561
0.556
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AB05458.1
Zinc cluster
13
50
AACLNCRKSKIKCRREEGAPVCERCHNVGVECIIPEFH
Links
Other
Zinc cluster
family TFs
Other
Alternaria brassicicola
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANIA_09395
Aspergillus nidulans
CADANIAG00001182
D
0.561
COCC4DRAFT_147176
Bipolaris maydis
COCC4DRAFT_147176
I
0.633
COCCADRAFT_31925
Bipolaris zeicola
COCCADRAFT_31925
I
0.633
COCMIDRAFT_92286
Bipolaris oryzae
COCMIDRAFT_92286
I
0.633
COCSADRAFT_197722
Bipolaris sorokiniana
COCSADRAFT_197722
I
0.633
COCVIDRAFT_40573
Bipolaris victoriae
COCVIDRAFT_40573
I
0.633
EURHEDRAFT_483140
Aspergillus ruber
EURHEDRAFT_483140
I
0.578
e_gw1.8.42.1
Cochliobolus heterostrophus C5
e_gw1.8.42.1
I
0.633
fgenesh1_pm.00771_#_437
Aspergillus carbonarius
fgenesh1_pm.00771_#_437
I
0.541
OIDMADRAFT_40903
Oidiodendron maius
OIDMADRAFT_40903
N
0.547
PTT_02800
Pyrenophora teres
PTT_02800
I
0.641
SETTUDRAFT_137478
Setosphaeria turcica
SETTUDRAFT_137478
I
0.625
SNOG_02274
Stagonospora nodorum
SNOG_02274
I
0.633
SNOG_02274
Phaeosphaeria nodorum
SNOG_02274
I
0.633
SS1G_07091
Sclerotinia sclerotiorum
SS1G_07091
I
0.555