CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.8.42.1
(
Cochliobolus heterostrophus C5
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
e_gw1.8.42.1
T389513_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_09395
M01339_2.00
Aspergillus nidulans
NNNNNNNHDN
NHDNNNNNNN
PBM
Lambert et al.(2019)
pEX0383
0.561
0.583
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.8.42.1
Zinc cluster
6
43
AACLNCRKSKIKCRREEGASVCERCSSVGVECIIPEFH
Links
Other
Zinc cluster
family TFs
Other
Cochliobolus heterostrophus C5
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
COCC4DRAFT_147176
Bipolaris maydis
COCC4DRAFT_147176
I
0.683
COCCADRAFT_31925
Bipolaris zeicola
COCCADRAFT_31925
I
0.683
COCSADRAFT_197722
Bipolaris sorokiniana
COCSADRAFT_197722
I
0.683
COCVIDRAFT_40573
Bipolaris victoriae
COCVIDRAFT_40573
I
0.683
COCMIDRAFT_92286
Bipolaris oryzae
COCMIDRAFT_92286
I
0.659
PTT_02800
Pyrenophora teres
PTT_02800
I
0.657
SNOG_02274
Stagonospora nodorum
SNOG_02274
I
0.641
SNOG_02274
Phaeosphaeria nodorum
SNOG_02274
I
0.641
SETTUDRAFT_137478
Setosphaeria turcica
SETTUDRAFT_137478
I
0.633
AB05458.1
Alternaria brassicicola
AB05458.1
I
0.633
EURHEDRAFT_483140
Aspergillus ruber
EURHEDRAFT_483140
I
0.578
ANIA_09395
Aspergillus nidulans
CADANIAG00001182
D
0.561
SS1G_07091
Sclerotinia sclerotiorum
SS1G_07091
I
0.555
OIDMADRAFT_40903
Oidiodendron maius
OIDMADRAFT_40903
N
0.546
fgenesh1_pm.00771_#_437
Aspergillus carbonarius
fgenesh1_pm.00771_#_437
I
0.541