CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.2.156.1
(
Cryphonectria parasitica
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
e_gw1.2.156.1
T391090_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
col-21
M02600_2.00
Neurospora crassa
CGGMGWTA
TAWCKCCG
PBM
Weirauch et al.(2014)
pTH8945
0.578
0.784
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.2.156.1
Zinc cluster
49
87
ISCTECHRRKQKCDRGFPCTNCVSRNKQDSCRYETGAPT
Links
Other
Zinc cluster
family TFs
Other
Cryphonectria parasitica
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BBA_05407
Beauveria bassiana
BBA_05407
N
0.547
CCM_05255
Cordyceps militaris
CCM_05255
N
0.572
CFIO01_04511
Colletotrichum fioriniae
CFIO01_04511
I
0.611
CH063_11230
Colletotrichum higginsianum
CH063_11230
I
0.611
CHGG_08197
Chaetomium globosum
CHGG_08197
I
0.605
Cob_03888
Colletotrichum orbiculare
Cob_03888
I
0.564
col-21
Neurospora crassa
NCU03489
D
0.578
fgenesh1_pm.sca_3_chr4_2_0000157
Nectria haematococca
fgenesh1_pm.sca_3_chr4_2_0000157
I
0.564
FGRRES_05157
Fusarium graminearum
FGRRES_05157
I
0.642
FPSE_06556
Fusarium pseudograminearum
FPSE_06556
I
0.642
GLRG_08668
Colletotrichum graminicola
GLRG_08668
I
0.611
MAC_07236
Metarhizium acridum
MAC_07236
N
0.549
MANI_028761
Metarhizium anisopliae
MANI_028761
N
0.547
MBM_02770
Marssonina brunnea
MBM_02770
N
0.552
MBR_05091
Metarhizium brunneum
MBR_05091
N
0.547
MGU_01580
Metarhizium guizhouense
MGU_01580
N
0.547
MYCTH_2311492
Myceliophthora thermophila
MYCTH_2311492
I
0.654
NechaG92542
Fusarium solani
NechaG92542
I
0.564
NEUTE1DRAFT_66044
Neurospora tetrasperma
NEUTE1DRAFT_66044
I
0.625
OIDMADRAFT_105997
Oidiodendron maius
OIDMADRAFT_105997
N
0.552
PODANS_6_4250
Podospora anserina
PODANS_6_4250
I
0.628
S40285_03084
Stachybotrys chlorohalonata
S40285_03084
N
0.596
S40288_01677
Stachybotrys chartarum
S40288_01677
N
0.596
SMAC_07224
Sordaria macrospora
SMAC_07224
I
0.625
TRIATDRAFT_315339
Trichoderma atroviride
TRIATDRAFT_315339
I
0.553
TRIVIDRAFT_229893
Trichoderma virens
TRIVIDRAFT_229893
I
0.547
UCRPA7_8227
Togninia minima
UCRPA7_8227
I
0.658
VDAG_07012
Verticillium dahliae
VDAG_07012
I
0.592
VHEMI05522
Torrubiella hemipterigena
VHEMI05522
I
0.614
X797_008871
Metarhizium robertsii
X797_008871
N
0.547