CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SAKL0H13024g
(
Lachancea kluyveri
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
SAKL0H13024g
T392269_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
UPC2
M00920_2.00
Saccharomyces cerevisiae
NTCGTWYVN
NBRWACGAN
PBM
Gordan et al.(2011)
Upc2
0.596
0.846
UPC2
M07508_2.00
Saccharomyces cerevisiae
NRWACGA
TCGTWYN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0411.1
0.596
0.846
UPC2
M08654_2.00
Saccharomyces cerevisiae
NRWACGA
TCGTWYN
Misc
DeBoer et al.(2011)
YDR213W_544
0.596
0.846
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SAKL0H13024g
Zinc cluster
52
91
NGCDNCKRRRVKCDEGKPCCQKCINMKLECVYTPITQRKK
Links
Other
Zinc cluster
family TFs
Other
Lachancea kluyveri
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy