ABI4 (Arabidopsis lyrata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Al_scaffold_0004_2621 T000321_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
abi4
M02648_2.00 		Zea mays
CGSYGCYBYB
VRVRGCRSCG		 SELEX
Mathelier et al.(2014)
MA0123.1 		0.782 0.920
abi4
M09706_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABI4_01 		0.782 0.920
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Al_scaffold_0004_2621 AP2 54 105

Links

Other AP2 family TFs
Other Arabidopsis lyrata TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ASU_02611 Ascaris suum ASU_02611 N
nDi.2.2.2.g07634 Dirofilaria immitis nDi.2.2.2.g07634 N
GPUH_0001628601 Gongylonema pulchrum GPUH_0001628601 N
nLs.2.1.2.g07567 Litomosoides sigmodontis nLs.2.1.2.g07567 N
LOAG_08235 Loa loa LOAG_08235 N
OFLC_0001050101 Onchocerca flexuosa OFLC_0001050101 N
nOo.2.0.1.g05364 Onchocerca ochengi nOo.2.0.1.g05364 N
WBGene00246599 Onchocerca volvulus WBGene00246599 N
TELCIR_12880 Teladorsagia circumcincta TELCIR_12880 N
WUBG_17286 Wuchereria bancrofti WUBG_17286 N