CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ERF034
(
Arabidopsis thaliana
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
AT2G44940
T000463_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF034
M06614_2.00
Arabidopsis thaliana
NHNYCACCGACANHD
HDNTGTCGGTGRNDN
Dap-seq
OMalley et al.(2016)
At2g44940_col_a
(Direct)
(Direct)
ERF034
M06615_2.00
Arabidopsis thaliana
NDBCACCGACANH
DNTGTCGGTGVHN
Dap-seq
OMalley et al.(2016)
At2g44940_colamp_a
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF035
M06631_2.00
Arabidopsis thaliana
YCACCGACANWDNH
DNHWNTGTCGGTGR
Dap-seq
OMalley et al.(2016)
AT3G60490_col_a
0.800
0.940
ERF035
M06632_2.00
Arabidopsis thaliana
NNBCACCGACAHWNNN
NNNWDTGTCGGTGVNN
Dap-seq
OMalley et al.(2016)
AT3G60490_colamp_a
0.800
0.940
ERF043
M01627_2.00
Arabidopsis thaliana
YRCCGACA
TGTCGGYR
PBM
Weirauch et al.(2014)
pTH7413
0.788
0.900
ERF043
M06651_2.00
Arabidopsis thaliana
NNYCACCGACANHNNN
NNNDNTGTCGGTGRNN
Dap-seq
OMalley et al.(2016)
At4g32800_colamp_a
0.788
0.900
ERF043
M06652_2.00
Arabidopsis thaliana
NNYCACCGACANHNNH
DNNDNTGTCGGTGRNN
Dap-seq
OMalley et al.(2016)
At4g32800_col
0.788
0.900
Q8LKX0_MAIZE
M09722_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DBF2_01
0.776
0.920
Q5MAR7_BRANA
M09742_2.00
Brassica napus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREBIII1_01
0.737
0.900
Q3HS44_BRANA
M09741_2.00
Brassica napus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREBIII2_01
0.737
0.900
Q3HS43_BRANA
M09740_2.00
Brassica napus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREBIII3_01
0.737
0.900
AT3G16280
M06618_2.00
Arabidopsis thaliana
NDNCACCGACANHN
NDNTGTCGGTGNHN
Dap-seq
OMalley et al.(2016)
AT3G16280_col_a
0.729
0.840
AT3G16280
M06619_2.00
Arabidopsis thaliana
BCACCGACAHWNNN
NNNWDTGTCGGTGV
Dap-seq
OMalley et al.(2016)
AT3G16280_colamp_a
0.729
0.840
ERF039
M01620_2.00
Arabidopsis thaliana
NNRCCGACDN
NHGTCGGYNN
PBM
Weirauch et al.(2014)
pTH8101
0.721
0.880
ERF039
M06635_2.00
Arabidopsis thaliana
HNNHDYCRCCGMCRN
NYGKCGGYGRHDNND
Dap-seq
OMalley et al.(2016)
At4g16750_col_a
0.721
0.880
ERF039
M06636_2.00
Arabidopsis thaliana
NNNNNNYCACCGACAHH
DDTGTCGGTGRNNNNNN
Dap-seq
OMalley et al.(2016)
At4g16750_colamp_a
0.721
0.880
ERF038
M06608_2.00
Arabidopsis thaliana
NHNHHDYCRCCGACA
TGTCGGYGRHDDNDN
Dap-seq
OMalley et al.(2016)
ERF38_col_a
0.721
0.860
ERF037
M00843_2.00
Arabidopsis thaliana
NRCCGACRN
NYGTCGGYN
PBM
Franco-Zorrilla et al.(2014)
At1g77200
0.716
0.880
ERF037
M06599_2.00
Arabidopsis thaliana
YCRCCGACAHHNNH
DNNDDTGTCGGYGR
Dap-seq
OMalley et al.(2016)
AT1G77200_col_a
0.716
0.880
ERF037
M06600_2.00
Arabidopsis thaliana
NNYACCGACAHN
NDTGTCGGTRNN
Dap-seq
OMalley et al.(2016)
AT1G77200_colamp_a
0.716
0.880
TINY
M01094_2.00
Arabidopsis thaliana
NHRCCGACAN
NTGTCGGYDN
PBM
Lambert et al.(2019)
pTH11541
0.696
0.860
TINY
M06669_2.00
Arabidopsis thaliana
HNYCRCCGACANHDN
NHDNTGTCGGYGRND
Dap-seq
OMalley et al.(2016)
TINY_col_a
0.696
0.860
Q3HS42_BRANA
M09739_2.00
Brassica napus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREBIII4_01
0.694
0.880
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT2G44940.1
AP2
98
149
PTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGT
Links
Other
AP2
family TFs
Other
Arabidopsis thaliana
TFs
461 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000001627
Ailuropoda melanoleuca
ENSAMEG00000001627
I
ENSAMEG00000006413
Ailuropoda melanoleuca
ENSAMEG00000006413
I
ENSAPLG00000009060
Anas platyrhynchos
ENSAPLG00000009060
I
ENSAPLG00000016372
Anas platyrhynchos
ENSAPLG00000016372
I
FOXN3
Anolis carolinensis
ENSACAG00000012791
I
FOXN2
Anolis carolinensis
ENSACAG00000014236
I
ENSAMXG00000001149
Astyanax mexicanus
ENSAMXG00000001149
I
ENSAMXG00000009484
Astyanax mexicanus
ENSAMXG00000009484
I
ENSAMXG00000018596
Astyanax mexicanus
ENSAMXG00000018596
I
ACEP19737
Atta cephalotes
ACEP19737
I
ENSP00000394031-D1
Bos grunniens
ENSP00000394031-D1
I
FOXN2
Bos taurus
ENSBTAG00000015151
I
gw.10.104.1
Branchiostoma floridae
gw.10.104.1
I
gw.384.13.1
Branchiostoma floridae
gw.384.13.1
I
FOXN2
Callithrix jacchus
ENSCJAG00000010894
I
FOXN3
Callithrix jacchus
ENSCJAG00000017620
I
FOXN3
Canis familiaris
ENSCAFG00000011068
I
FOXN2
Canis familiaris
ENSCAFG00000029603
I
FOXN3
Cavia porcellus
ENSCPOG00000004079
I
ENSCPOG00000026162
Cavia porcellus
ENSCPOG00000026162
I
ENSCSAG00000013601
Chlorocebus sabaeus
ENSCSAG00000013601
I
CGI_10011126
Crassostrea gigas
CGI_10011126
I
KGM_12006
Danaus plexippus
KGM_12006
I
foxn3
Danio rerio
ENSDARG00000012833
I
ches1
Danio rerio
ENSDARG00000043553
I
foxn2b
Danio rerio
ENSDARG00000045105
I
CABZ01056727.1
Danio rerio
ENSDARG00000055574
I
FOXN3
Dasypus novemcinctus
ENSDNOG00000003188
I
FOXN2
Dasypus novemcinctus
ENSDNOG00000035609
I
Foxn2
Dipodomys ordii
ENSDORG00000007020
I
FOXN2
Echinops telfairi
ENSETEG00000007413
I
FOXN2
Equus caballus
ENSECAG00000008390
I
ENSEEUG00000008958
Erinaceus europaeus
ENSEEUG00000008958
I
FOXN2
Erinaceus europaeus
ENSEEUG00000015228
I
FOXN3
Felis catus
ENSFCAG00000012929
I
FOXN2
Felis catus
ENSFCAG00000022828
I
ENSFALG00000011112
Ficedula albicollis
ENSFALG00000011112
I
ENSFALG00000012332
Ficedula albicollis
ENSFALG00000012332
I
ENSGMOG00000003346
Gadus morhua
ENSGMOG00000003346
I
ENSGMOG00000016028
Gadus morhua
ENSGMOG00000016028
I
ENSGMOG00000018188
Gadus morhua
ENSGMOG00000018188
I
FOXN2
Gallus gallus
ENSGALG00000008942
I
FOXN3
Gallus gallus
ENSGALG00000010665
I
foxn2b
Gasterosteus aculeatus
ENSGACG00000005486
I
FOXN2
Gorilla gorilla
ENSGGOG00000008171
I
FOXN3
Gorilla gorilla
ENSGGOG00000023852
I
HMEL010214
Heliconius melpomene
HMEL010214
I
FOXN3
Homo sapiens
ENSG00000053254
D
FOXN2
Homo sapiens
ENSG00000170802
D
ENSSTOG00000000862
Ictidomys tridecemlineatus
ENSSTOG00000000862
I
ENSSTOG00000014643
Ictidomys tridecemlineatus
ENSSTOG00000014643
I
ENSLACG00000006234
Latimeria chalumnae
ENSLACG00000006234
I
ENSLACG00000013808
Latimeria chalumnae
ENSLACG00000013808
I
ENSLACG00000015298
Latimeria chalumnae
ENSLACG00000015298
I
ENSLOCG00000000880
Lepisosteus oculatus
ENSLOCG00000000880
I
ENSLOCG00000016292
Lepisosteus oculatus
ENSLOCG00000016292
I
FOXN2
Loxodonta africana
ENSLAFG00000012466
I
FOXN3
Loxodonta africana
ENSLAFG00000016005
I
ENSP00000261302
Macaca fascicularis
ENSP00000261302
I
ENSP00000343633
Macaca fascicularis
ENSP00000343633
I
FOXN3
Macaca mulatta
ENSMMUG00000019898
I
FOXN2
Macaca mulatta
ENSMMUG00000020677
I
ENSMEUG00000000214
Macropus eugenii
ENSMEUG00000000214
I
FOXN2
Meleagris gallopavo
ENSMGAG00000005062
I
FOXN3
Meleagris gallopavo
ENSMGAG00000013026
I
FOXN2
Monodelphis domestica
ENSMODG00000001169
I
ENSMPUG00000008174
Mustela putorius furo
ENSMPUG00000008174
I
ENSMPUG00000010993
Mustela putorius furo
ENSMPUG00000010993
I
Foxn3
Mus musculus
ENSMUSG00000033713
I
Foxn2
Mus musculus
ENSMUSG00000034998
I
Myotis_brandtii_FOXN2_10033482
Myotis brandtii
Myotis_brandtii_FOXN2_10033482
I
FOXN3
Myotis lucifugus
ENSMLUG00000008780
I
FOXN2
Myotis lucifugus
ENSMLUG00000017567
I
NEMVEDRAFT_v1g67209
Nematostella vectensis
NEMVEDRAFT_v1g67209
D
ENSNLEG00000008649
Nomascus leucogenys
ENSNLEG00000008649
I
ENSNLEG00000016989
Nomascus leucogenys
ENSNLEG00000016989
I
FOXN3
Ochotona princeps
ENSOPRG00000002931
I
FOXN2
Ochotona princeps
ENSOPRG00000007661
I
Ogr01321
Ophisaurus gracilis
Ogr01321
I
Ogr07715
Ophisaurus gracilis
Ogr07715
I
ENSONIG00000001158
Oreochromis niloticus
ENSONIG00000001158
I
ENSONIG00000009856
Oreochromis niloticus
ENSONIG00000009856
I
FOXN3
Oryctolagus cuniculus
ENSOCUG00000004392
I
FOXN2
Oryctolagus cuniculus
ENSOCUG00000009784
I
ches1
Oryzias latipes
ENSORLG00000010729
I
foxn2b
Oryzias latipes
ENSORLG00000011005
I
FOXN3
Otolemur garnettii
ENSOGAG00000001733
I
FOXN2
Otolemur garnettii
ENSOGAG00000011745
I
ENSOARG00000004763
Ovis aries
ENSOARG00000004763
I
FOXN3
Pan troglodytes
ENSPTRG00000006614
I
FOXN2
Pan troglodytes
ENSPTRG00000011908
I
ENSPANG00000013263
Papio anubis
ENSPANG00000013263
I
ENSPANG00000016397
Papio anubis
ENSPANG00000016397
I
ENSPSIG00000013517
Pelodiscus sinensis
ENSPSIG00000013517
I
ENSPFOG00000001305
Poecilia formosa
ENSPFOG00000001305
I
ENSPFOG00000015286
Poecilia formosa
ENSPFOG00000015286
I
Pvit_15105
Pogona vitticeps
Pvit_15105
I
ENSPPYG00000012423
Pongo abelii
ENSPPYG00000012423
I
FOXN2
Procavia capensis
ENSPCAG00000005254
I
FOXN3
Procavia capensis
ENSPCAG00000013761
I
FOXN2
Pteropus vampyrus
ENSPVAG00000003737
I
Foxn3
Rattus norvegicus
ENSRNOG00000004709
I
Foxn2
Rattus norvegicus
ENSRNOG00000040110
I
Sakowv30028653m.g
Saccoglossus kowalevskii
Sakowv30028653m.g
I
ENSSHAG00000001461
Sarcophilus harrisii
ENSSHAG00000001461
I
ENSSHAG00000010850
Sarcophilus harrisii
ENSSHAG00000010850
I
SINV12530
Solenopsis invicta
SINV12530
I
FOXN2
Sorex araneus
ENSSARG00000003696
I
FOXN3
Sus scrofa
ENSSSCG00000002429
I
FOXN2
Sus scrofa
ENSSSCG00000029593
I
ENSTGUG00000012441
Taeniopygia guttata
ENSTGUG00000012441
I
ches1
Takifugu rubripes
ENSTRUG00000003497
I
foxn2b
Takifugu rubripes
ENSTRUG00000013724
I
ENSTSYG00000014704
Tarsius syrichta
ENSTSYG00000014704
I
tetur19g01540
Tetranychus urticae
tetur19g01540
I
foxn2b
Tetraodon nigroviridis
ENSTNIG00000016601
I
TC030764
Tribolium castaneum
TC030764
I
FOXN3
Tupaia belangeri
ENSTBEG00000003603
I
FOXN3
Tursiops truncatus
ENSTTRG00000000817
I
FOXN2
Tursiops truncatus
ENSTTRG00000003735
I
FOXN2
Vicugna pacos
ENSVPAG00000009218
I
foxn2.S
Xenopus laevis
XB-GENE-952923
I
foxn3
Xenopus tropicalis
XB-GENE-483117
I
foxn2
Xenopus tropicalis
XB-GENE-952918
I
L798_02484
Zootermopsis nevadensis
L798_02484
I