Bo2g016490 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo2g016490 T000742_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.788 0.920
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.704 0.780
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.704 0.780
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.704 0.780
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.686 0.800
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.684 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo2g016490.1 AP2 32 83

Links

Other AP2 family TFs
Other Brassica oleracea TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AOL_s00004g69 Arthrobotrys oligospora AOL_s00004g69 N
CFIO01_03903 Colletotrichum fioriniae CFIO01_03903 N
CCM_08920 Cordyceps militaris CCM_08920 N
fgenesh1_pg.C_scaffold_3001208 Cryphonectria parasitica fgenesh1_pg.C_scaffold_3001208 N
H072_10795 Dactylellina haptotyla H072_10795 N
A1O9_07304 Exophiala aquamarina A1O9_07304 N
PV08_09655 Exophiala spinifera PV08_09655 N
S40288_02283 Stachybotrys chartarum S40288_02283 N
S40285_07144 Stachybotrys chlorohalonata S40285_07144 N
TSTA_023870 Talaromyces stipitatus TSTA_023870 N