Bo4g027470 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo4g027470 T000808_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2E
M06609_2.00 		Arabidopsis thaliana
NNNHNHMACCGMCWTWD
HWAWGKCGGTKDNDNNN		 Dap-seq
OMalley et al.(2016)
DREB19_col_a 		0.681 0.774
DREB2E
M06610_2.00 		Arabidopsis thaliana
HNHMACCGACWTWD
HWAWGTCGGTKDND		 Dap-seq
OMalley et al.(2016)
DREB19_colamp_a 		0.681 0.774
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g027470.1 AP2 73 129

Links

Other AP2 family TFs
Other Brassica oleracea TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALNC14_038710 Albugo laibachii ALNC14_038710 N 0.000
ALNC14_045170 Albugo laibachii ALNC14_045170 N 0.000
HpaG811065 Hyaloperonospora arabidopsidis HpaG811065 N 0.000
estExt_Genewise1.C_70435 Phytophthora capsici estExt_Genewise1.C_70435 N 0.000
PITG_06748 Phytophthora infestans PITG_06748 N 0.000
fgenesh_scip_prom.28083.5589 Phytophthora lateralis fgenesh_scip_prom.28083.5589 N 0.000
F443_08670 Phytophthora parasitica F443_08670 N 0.000
Phyra86538 Phytophthora ramorum Phyra86538 N 0.000
Physo140839 Phytophthora sojae Physo140839 N 0.000
maker-pag1_scaffold_818-snap-gene-0.3 Pythium aphanidermatum maker-pag1_scaffold_818-snap-gene-0.3 N 0.000
maker-pir_contig_67-snap-gene-0.23 Pythium irregulare maker-pir_contig_67-snap-gene-0.23 N 0.000
PYU1_G010470 Pythium ultimum PYU1_G010470 N 0.000
maker-pve_contig_870-fgenesh-gene-0.0 Pythium vexans maker-pve_contig_870-fgenesh-gene-0.0 N 0.000
SPRG_00677 Saprolegnia parasitica SPRG_00677 N 0.000