Bo4g027470 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo4g027470 T000808_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2E
M06609_2.00 		Arabidopsis thaliana
NNNHNHMACCGMCWTWD
HWAWGKCGGTKDNDNNN		 Dap-seq
OMalley et al.(2016)
DREB19_col_a 		0.681 0.774
DREB2E
M06610_2.00 		Arabidopsis thaliana
HNHMACCGACWTWD
HWAWGTCGGTKDND		 Dap-seq
OMalley et al.(2016)
DREB19_colamp_a 		0.681 0.774
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g027470.1 AP2 73 129

Links

Other AP2 family TFs
Other Brassica oleracea TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra005113 Brassica rapa Bra005113 N 0.802
Thhalv10017658m.g Eutrema salsugineum Thhalv10017658m.g I 0.749
Bostr.23794s0238 Boechera stricta Bostr.23794s0238 I 0.688
Cagra.5557s0006 Capsella grandiflora Cagra.5557s0006 I 0.688
Carubv10024477m.g Capsella rubella Carubv10024477m.g I 0.688
DREB2E Arabidopsis thaliana AT2G38340 D 0.681
DREB19 Arabidopsis lyrata fgenesh2_kg.4__1905__AT2G38340.1 I 0.681