Bo5g136930 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo5g136930 T000853_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2A
M06655_2.00 		Arabidopsis thaliana
NNNNHDHMACCGMCWYHNNNN
NNNNDRWGKCGGTKDHDNNNN		 Dap-seq
OMalley et al.(2016)
DREB2_col_a 		0.733 0.860
DREB2A
M06656_2.00 		Arabidopsis thaliana
NHNHMACCGMCWTWD
HWAWGKCGGTKDNDN		 Dap-seq
OMalley et al.(2016)
DREB2_colamp_a 		0.733 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g136930.1 AP2 79 130

Links

Other AP2 family TFs
Other Brassica oleracea TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g04870 Acanthocheilonema viteae nAv.1.0.1.g04870 N 0.000
ASU_05009 Ascaris suum ASU_05009 N 0.000
Bm7640 Brugia malayi Bm7640 N 0.000
BXY_0855500 Bursaphelenchus xylophilus BXY_0855500 N 0.000
dve-1 Caenorhabditis elegans WBGene00022861 N 0.000
nDi.2.2.2.g01589 Dirofilaria immitis nDi.2.2.2.g01589 N 0.000
EEL_0000412901 Elaeophora elaphi EEL_0000412901 N 0.000
EVEC_0001166801 Enterobius vermicularis EVEC_0001166801 N 0.000
Hba_21527 Heterorhabditis bacteriophora Hba_21527 N 0.000
nOo.2.0.1.g00722 Onchocerca ochengi nOo.2.0.1.g00722 N 0.000
WBGene00239750 Onchocerca volvulus WBGene00239750 N 0.000
PTRK_0000043500 Parastrongyloides trichosuri PTRK_0000043500 N 0.000
RSKR_0001108600 Rhabditophanes kr3021 RSKR_0001108600 N 0.000
L596_g9224 Steinernema carpocapsae L596_g9224 N 0.000
L889_g25145 Steinernema feltiae L889_g25145 N 0.000
L898_g34810 Steinernema monticolum L898_g34810 N 0.000
L892_g9710 Steinernema scapterisci L892_g9710 N 0.000
SPAL_0000744000 Strongyloides papillosus SPAL_0000744000 N 0.000
SVE_1021200 Strongyloides venezuelensis SVE_1021200 N 0.000
SMUV_0000944701 Syphacia muris SMUV_0000944701 N 0.000
TCLT_0000625901 Thelazia callipaeda TCLT_0000625901 N 0.000
WUBG_04888 Wuchereria bancrofti WUBG_04888 N 0.000