Bo8g050800 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo8g050800 T000924_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q8W242_BRANA
M09747_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBF_01 		0.769 0.980
Q8S2T2_BRANA
M09744_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBF17_01 		0.769 0.980
A6N8P3_BRANA
M09738_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBI5_01 		0.769 0.980
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.692 0.920
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.692 0.920
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.692 0.920
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.692 0.920
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.691 0.940
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.691 0.940
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.685 0.880
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.685 0.880
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.685 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo8g050800.1 AP2 51 102

Links

Other AP2 family TFs
Other Brassica oleracea TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGOS_AER159C Ashbya gossypii AGOS_AER159C I
CAGL0H04213g Candida glabrata CAGL0H04213g I
CAGL0M00594g Candida glabrata CAGL0M00594g I
KAFR_0B06810 Kazachstania africana KAFR_0B06810 I
KAFR_0E04270 Kazachstania africana KAFR_0E04270 I
KLLA0_B04477g Kluyveromyces lactis KLLA0_B04477g I
KLTH0D18062g Kluyveromyces thermotolerans KLTH0D18062g I
Kwal_16621 Kluyveromyces waltii Kwal_16621 I
SAKL0G18062g Lachancea kluyveri SAKL0G18062g I
LALA0_S08e05644g Lachancea lanzarotensis LALA0_S08e05644g I
NCAS_0A06250 Naumovozyma castellii NCAS_0A06250 I
NDAI_0J02850 Naumovozyma dairenensis NDAI_0J02850 I
NDAI_0D03240 Naumovozyma dairenensis NDAI_0D03240 I
SU7_2441 Saccharomyces arboricola SU7_2441 I
18114_YML081W Saccharomyces bayanus 18114_YML081W I
13784_YJR127C Saccharomyces bayanus 13784_YJR127C I
Scas_Contig703.23 Saccharomyces castellii Scas_Contig703.23 I
RSF2 Saccharomyces cerevisiae YJR127C D
TDA9 Saccharomyces cerevisiae YML081W D
SKUD_162303 Saccharomyces kudriavzevii SKUD_162303 I
16099_Multiple Saccharomyces mikatae 16099_Multiple I
12664_YJR127C Saccharomyces mikatae 12664_YJR127C I
17638_YML081W Saccharomyces paradoxus 17638_YML081W I
12764_Multiple Saccharomyces paradoxus 12764_Multiple I
AACERI_AaceriAER159C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAER159C I
TBLA_0E04770 Tetrapisispora blattae TBLA_0E04770 I
TBLA_0B06160 Tetrapisispora blattae TBLA_0B06160 I
TPHA_0B00380 Tetrapisispora phaffii TPHA_0B00380 I
TDEL_0D00670 Torulaspora delbrueckii TDEL_0D00670 I
ZBAI_08875 Zygosaccharomyces bailii ZBAI_08875 I
ZBAI_03168 Zygosaccharomyces bailii ZBAI_03168 I
ZBAI_03167 Zygosaccharomyces bailii ZBAI_03167 I
ZYRO0B14894g Zygosaccharomyces rouxii ZYRO0B14894g I