LPERR06G07210 (Leersia perrieri)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 LPERR06G07210 T002622_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.825 0.900
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.825 0.900
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.822 0.900
AT5G65130
M06686_2.00 		Arabidopsis thaliana
YCDYCDCCRCCGCCN
NGGCGGYGGHGRHGR		 Dap-seq
OMalley et al.(2016)
At5g65130_col_a 		0.679 0.820
AT5G65130
M06687_2.00 		Arabidopsis thaliana
NNNNHNNHDSCRCCGMCMW
WKGKCGGYGSHDNNDNNNN		 Dap-seq
OMalley et al.(2016)
At5g65130_colamp_a 		0.679 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR06G07210.1 AP2 166 217

Links

Other AP2 family TFs
Other Leersia perrieri TFs

430 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TVAG_514650 Trichomonas vaginalis TVAG_514650 N 0.000
TVAG_323180 Trichomonas vaginalis TVAG_323180 N 0.000
TVAG_345660 Trichomonas vaginalis TVAG_345660 N 0.000
TVAG_345950 Trichomonas vaginalis TVAG_345950 N 0.000
TVAG_353570 Trichomonas vaginalis TVAG_353570 N 0.000
TVAG_357040 Trichomonas vaginalis TVAG_357040 N 0.000
TVAG_372820 Trichomonas vaginalis TVAG_372820 N 0.000
TVAG_384790 Trichomonas vaginalis TVAG_384790 N 0.000
TVAG_415680 Trichomonas vaginalis TVAG_415680 N 0.000
TVAG_439560 Trichomonas vaginalis TVAG_439560 N 0.000
TVAG_453000 Trichomonas vaginalis TVAG_453000 N 0.000
TVAG_488790 Trichomonas vaginalis TVAG_488790 N 0.000
TVAG_504700 Trichomonas vaginalis TVAG_504700 N 0.000
TVAG_506740 Trichomonas vaginalis TVAG_506740 N 0.000
TVAG_509250 Trichomonas vaginalis TVAG_509250 N 0.000
TVAG_313920 Trichomonas vaginalis TVAG_313920 N 0.000
TVAG_515220 Trichomonas vaginalis TVAG_515220 N 0.000
TVAG_520250 Trichomonas vaginalis TVAG_520250 N 0.000
TVAG_528340 Trichomonas vaginalis TVAG_528340 N 0.000
TVAG_546680 Trichomonas vaginalis TVAG_546680 N 0.000
TVAG_547380 Trichomonas vaginalis TVAG_547380 I 0.000
TVAG_550490 Trichomonas vaginalis TVAG_550490 N 0.000
TVAG_552020 Trichomonas vaginalis TVAG_552020 N 0.000
TVAG_568350 Trichomonas vaginalis TVAG_568350 N 0.000
TVAG_574310 Trichomonas vaginalis TVAG_574310 N 0.000
TVAG_574820 Trichomonas vaginalis TVAG_574820 N 0.000
TVAG_579060 Trichomonas vaginalis TVAG_579060 N 0.000
TVAG_581440 Trichomonas vaginalis TVAG_581440 N 0.000
TVAG_582290 Trichomonas vaginalis TVAG_582290 N 0.000
TVAG_582310 Trichomonas vaginalis TVAG_582310 N 0.000
TVAG_164060 Trichomonas vaginalis TVAG_164060 N 0.000
TVAG_009130 Trichomonas vaginalis TVAG_009130 N 0.000
TVAG_029800 Trichomonas vaginalis TVAG_029800 N 0.000
TVAG_039590 Trichomonas vaginalis TVAG_039590 N 0.000
TVAG_072940 Trichomonas vaginalis TVAG_072940 N 0.000
TVAG_114620 Trichomonas vaginalis TVAG_114620 N 0.000
TVAG_125240 Trichomonas vaginalis TVAG_125240 N 0.000
TVAG_129110 Trichomonas vaginalis TVAG_129110 N 0.000
TVAG_129120 Trichomonas vaginalis TVAG_129120 N 0.000
TVAG_132500 Trichomonas vaginalis TVAG_132500 N 0.000
TVAG_132770 Trichomonas vaginalis TVAG_132770 N 0.000
TVAG_132960 Trichomonas vaginalis TVAG_132960 N 0.000
TVAG_159700 Trichomonas vaginalis TVAG_159700 N 0.000
TVAG_160450 Trichomonas vaginalis TVAG_160450 N 0.000
TVAG_161450 Trichomonas vaginalis TVAG_161450 N 0.000
TVAG_007350 Trichomonas vaginalis TVAG_007350 N 0.000
TVAG_164960 Trichomonas vaginalis TVAG_164960 N 0.000
TVAG_204520 Trichomonas vaginalis TVAG_204520 N 0.000
TVAG_205770 Trichomonas vaginalis TVAG_205770 N 0.000
TVAG_208350 Trichomonas vaginalis TVAG_208350 N 0.000
TVAG_222670 Trichomonas vaginalis TVAG_222670 N 0.000
TVAG_232930 Trichomonas vaginalis TVAG_232930 N 0.000
TVAG_262670 Trichomonas vaginalis TVAG_262670 N 0.000
TVAG_282400 Trichomonas vaginalis TVAG_282400 N 0.000
TVAG_286640 Trichomonas vaginalis TVAG_286640 N 0.000
TVAG_290290 Trichomonas vaginalis TVAG_290290 N 0.000
TVAG_298590 Trichomonas vaginalis TVAG_298590 N 0.000
TVAG_298740 Trichomonas vaginalis TVAG_298740 N 0.000
TVAG_301700 Trichomonas vaginalis TVAG_301700 N 0.000