OBART03G11470 (Oryza barthii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OBART03G11470 T003105_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF014
M06581_2.00 		Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR		 Dap-seq
OMalley et al.(2016)
AT1G44830_col_a 		0.704 0.824
ERF012
M06570_2.00 		Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN		 Dap-seq
OMalley et al.(2016)
DREB26_col_a 		0.690 0.784
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART03G11470.1 AP2 93 144

Links

Other AP2 family TFs
Other Oryza barthii TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000015711 Ailuropoda melanoleuca ENSAMEG00000015711 I
Alligator_sinensis_CCG004791.1 Alligator sinensis Alligator_sinensis_CCG004791.1 I
PRDM6 Anolis carolinensis ENSACAG00000003401 I
ENSAMXG00000012588 Astyanax mexicanus ENSAMXG00000012588 I
ENSBTAP00000027421-D1 Bos grunniens ENSBTAP00000027421-D1 I
PRDM6 Bos taurus ENSBTAG00000020578 I
PRDM6 Callithrix jacchus ENSCJAG00000017318 I
PRDM6 Canis familiaris ENSCAFG00000023666 I
ENSCPOG00000004258 Cavia porcellus ENSCPOG00000004258 I
ENSCSAG00000014599 Chlorocebus sabaeus ENSCSAG00000014599 I
PRDM6 Dasypus novemcinctus ENSDNOG00000006337 I
PRDM6 Equus caballus ENSECAG00000004532 I
PRDM6 Erinaceus europaeus ENSEEUG00000005543 I
PRDM6 Felis catus ENSFCAG00000026249 I
ENSFALG00000007522 Ficedula albicollis ENSFALG00000007522 I
PRDM6 Gallus gallus ENSGALG00000005351 I
PRDM6 Homo sapiens ENSG00000061455 D
ENSLOCG00000008663 Lepisosteus oculatus ENSLOCG00000008663 I
PRDM6 Loxodonta africana ENSLAFG00000000396 I
ENSP00000261364 Macaca fascicularis ENSP00000261364 I
ENSMMUG00000010652 Macaca mulatta ENSMMUG00000010652 I
ENSMEUG00000011470 Macropus eugenii ENSMEUG00000011470 I
ENSMICG00000007754 Microcebus murinus ENSMICG00000007754 I
PRDM6 Monodelphis domestica ENSMODG00000013415 I
ENSMPUG00000012965 Mustela putorius furo ENSMPUG00000012965 I
Prdm6 Mus musculus ENSMUSG00000069378 I
Myotis_brandtii_PRDM6_10015768 Myotis brandtii Myotis_brandtii_PRDM6_10015768 I
PRDM6 Myotis lucifugus ENSMLUG00000010064 I
ENSNLEG00000012064 Nomascus leucogenys ENSNLEG00000012064 I
PRDM6 Ochotona princeps ENSOPRG00000004020 I
Ogr18847 Ophisaurus gracilis Ogr18847 I
ENSONIG00000013818 Oreochromis niloticus ENSONIG00000013818 I
ENSOANG00000001527 Ornithorhynchus anatinus ENSOANG00000001527 I
PRDM6 Oryctolagus cuniculus ENSOCUG00000003454 I
ENSORLG00000017089 Oryzias latipes ENSORLG00000017089 I
ENSOARG00000018873 Ovis aries ENSOARG00000018873 I
PRDM6 Pan troglodytes ENSPTRG00000017180 I
ENSPANG00000020936 Papio anubis ENSPANG00000020936 I
ENSPSIG00000007714 Pelodiscus sinensis ENSPSIG00000007714 I
ENSPFOG00000000918 Poecilia formosa ENSPFOG00000000918 I
Pvit_11059 Pogona vitticeps Pvit_11059 I
PRDM6 Pteropus vampyrus ENSPVAG00000006781 I
Prdm6 Rattus norvegicus ENSRNOG00000030486 I
ENSSHAG00000009542 Sarcophilus harrisii ENSSHAG00000009542 I
PRDM6 Sus scrofa ENSSSCG00000014238 I
PRDM6 Takifugu rubripes ENSTRUG00000011582 I
ENSTSYG00000009407 Tarsius syrichta ENSTSYG00000009407 I
ENSTNIG00000004450 Tetraodon nigroviridis ENSTNIG00000004450 I
PRDM6 Tupaia belangeri ENSTBEG00000010088 I
PRDM6 Tursiops truncatus ENSTTRG00000006808 I
prdm6 Xenopus tropicalis XB-GENE-854907 I