OBART09G07840 (Oryza barthii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OBART09G07840 T003168_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.789 0.915
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.789 0.915
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.789 0.915
AT5G65130
M06686_2.00 		Arabidopsis thaliana
YCDYCDCCRCCGCCN
NGGCGGYGGHGRHGR		 Dap-seq
OMalley et al.(2016)
At5g65130_col_a 		0.690 0.851
AT5G65130
M06687_2.00 		Arabidopsis thaliana
NNNNHNNHDSCRCCGMCMW
WKGKCGGYGSHDNNDNNNN		 Dap-seq
OMalley et al.(2016)
At5g65130_colamp_a 		0.690 0.851
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART09G07840.1 AP2 109 157

Links

Other AP2 family TFs
Other Oryza barthii TFs

424 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI005198 Acyrthosiphon pisum ACYPI005198 I 0.000
ENSAMEG00000016108 Ailuropoda melanoleuca ENSAMEG00000016108 I 0.000
Alligator_sinensis_CCG019430.1 Alligator sinensis Alligator_sinensis_CCG019430.1 I 0.000
ENSAPLG00000009927 Anas platyrhynchos ENSAPLG00000009927 N 0.000
MXD1 Anolis carolinensis ENSACAG00000006004 I 0.000
ENSP00000264444-D1 Bos grunniens ENSP00000264444-D1 I 0.000
MXD1 Bos taurus ENSBTAG00000001042 I 0.000
fgenesh2_pg.scaffold_205000025 Branchiostoma floridae fgenesh2_pg.scaffold_205000025 I 0.000
MXD1 Callithrix jacchus ENSCJAG00000019266 I 0.000
Aan_R005501 Calypte anna Aan_R005501 N 0.000
MXD1 Canis familiaris ENSCAFG00000032746 I 0.000
ENSCPOG00000007162 Cavia porcellus ENSCPOG00000007162 I 0.000
Cmyd_10006239 Chelonia mydas Cmyd_10006239 I 0.000
ENSCSAG00000015119 Chlorocebus sabaeus ENSCSAG00000015119 I 0.000
MXD1 Choloepus hoffmanni ENSCHOG00000003047 I 0.000
mxi1 Danio rerio ENSDARG00000040884 I 0.000
mxd1 Danio rerio ENSDARG00000032039 N 0.000
MXD1 Dasypus novemcinctus ENSDNOG00000034010 I 0.000
ENSDORG00000001608 Dipodomys ordii ENSDORG00000001608 I 0.000
MXD1 Echinops telfairi ENSETEG00000017347 I 0.000
MXD1 Equus caballus ENSECAG00000011257 I 0.000
MXD1 Felis catus ENSFCAG00000030345 I 0.000
MXD1 Gallus gallus ENSGALG00000013882 I 0.000
MXD1 Gorilla gorilla ENSGGOG00000011287 I 0.000
MXD1 Homo sapiens ENSG00000059728 I 0.000
ENSSTOG00000000718 Ictidomys tridecemlineatus ENSSTOG00000000718 I 0.000
ENSLACG00000017438 Latimeria chalumnae ENSLACG00000017438 I 0.000
ENSLOCG00000015320 Lepisosteus oculatus ENSLOCG00000015320 I 0.000
ENSP00000264444 Macaca fascicularis ENSP00000264444 I 0.000
ENSMMUG00000010226 Macaca mulatta ENSMMUG00000010226 I 0.000
ENSMEUG00000013693 Macropus eugenii ENSMEUG00000013693 I 0.000
MXD1 Meleagris gallopavo ENSMGAG00000003405 I 0.000
MXD1 Monodelphis domestica ENSMODG00000011481 I 0.000
ENSMPUG00000007107 Mustela putorius furo ENSMPUG00000007107 I 0.000
Mxd1 Mus musculus ENSMUSG00000001156 I 0.000
Myotis_brandtii_Mxd1_10023164 Myotis brandtii Myotis_brandtii_Mxd1_10023164 N 0.000
MXD1 Myotis lucifugus ENSMLUG00000016646 N 0.000
NV10716 Nasonia vitripennis NV10716 I 0.000
ENSNLEG00000010141 Nomascus leucogenys ENSNLEG00000010141 I 0.000
Ogr05439 Ophisaurus gracilis Ogr05439 I 0.000
ENSONIG00000015871 Oreochromis niloticus ENSONIG00000015871 I 0.000
MXD1 Oryctolagus cuniculus ENSOCUG00000015820 I 0.000
mxd1 Oryzias latipes ENSORLG00000015461 I 0.000
MXD1 Otolemur garnettii ENSOGAG00000008412 I 0.000
ENSOARG00000019742 Ovis aries ENSOARG00000019742 I 0.000
MXD1 Pan troglodytes ENSPTRG00000012023 I 0.000
ENSPANG00000000314 Papio anubis ENSPANG00000000314 I 0.000
ENSPMAG00000001074 Petromyzon marinus ENSPMAG00000001074 I 0.000
ENSPFOG00000004367 Poecilia formosa ENSPFOG00000004367 I 0.000
Pvit_06637 Pogona vitticeps Pvit_06637 I 0.000
ENSPPYG00000012331 Pongo abelii ENSPPYG00000012331 I 0.000
MXD1 Procavia capensis ENSPCAG00000001189 I 0.000
MXD1 Pteropus vampyrus ENSPVAG00000001244 I 0.000
Mxd1 Rattus norvegicus ENSRNOG00000017720 I 0.000
ENSSHAG00000005374 Sarcophilus harrisii ENSSHAG00000005374 I 0.000
MXD1 Sorex araneus ENSSARG00000004728 I 0.000
MXD1 Sus scrofa ENSSSCG00000008334 I 0.000
tetur09g05570 Tetranychus urticae tetur09g05570 I 0.000
mxd1 Tetraodon nigroviridis ENSTNIG00000000414 I 0.000
MXD1 Tupaia belangeri ENSTBEG00000005535 I 0.000
MXD1 Vicugna pacos ENSVPAG00000001762 I 0.000
mxd1.L Xenopus laevis XB-GENE-943720 N 0.000
mxd1 Xenopus tropicalis XB-GENE-943715 N 0.000
ENSXMAG00000004566 Xiphophorus maculatus ENSXMAG00000004566 I 0.000