OGLUM04G20760 (Oryza glumaepatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OGLUM04G20760 T003243_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF034
M06614_2.00 		Arabidopsis thaliana
NHNYCACCGACANHD
HDNTGTCGGTGRNDN		 Dap-seq
OMalley et al.(2016)
At2g44940_col_a 		0.786 0.940
ERF034
M06615_2.00 		Arabidopsis thaliana
NDBCACCGACANH
DNTGTCGGTGVHN		 Dap-seq
OMalley et al.(2016)
At2g44940_colamp_a 		0.786 0.940
ERF035
M06631_2.00 		Arabidopsis thaliana
YCACCGACANWDNH
DNHWNTGTCGGTGR		 Dap-seq
OMalley et al.(2016)
AT3G60490_col_a 		0.771 0.900
ERF035
M06632_2.00 		Arabidopsis thaliana
NNBCACCGACAHWNNN
NNNWDTGTCGGTGVNN		 Dap-seq
OMalley et al.(2016)
AT3G60490_colamp_a 		0.771 0.900
Q8LKX0_MAIZE
M09722_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DBF2_01 		0.758 0.940
ERF043
M01627_2.00 		Arabidopsis thaliana
YRCCGACA
TGTCGGYR		 PBM
Weirauch et al.(2014)
pTH7413 		0.758 0.880
ERF043
M06651_2.00 		Arabidopsis thaliana
NNYCACCGACANHNNN
NNNDNTGTCGGTGRNN		 Dap-seq
OMalley et al.(2016)
At4g32800_colamp_a 		0.758 0.880
ERF043
M06652_2.00 		Arabidopsis thaliana
NNYCACCGACANHNNH
DNNDNTGTCGGTGRNN		 Dap-seq
OMalley et al.(2016)
At4g32800_col 		0.758 0.880
Q5MAR7_BRANA
M09742_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBIII1_01 		0.742 0.920
Q3HS44_BRANA
M09741_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBIII2_01 		0.742 0.920
Q3HS43_BRANA
M09740_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBIII3_01 		0.742 0.920
ERF039
M01620_2.00 		Arabidopsis thaliana
NNRCCGACDN
NHGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH8101 		0.726 0.900
ERF039
M06635_2.00 		Arabidopsis thaliana
HNNHDYCRCCGMCRN
NYGKCGGYGRHDNND		 Dap-seq
OMalley et al.(2016)
At4g16750_col_a 		0.726 0.900
ERF039
M06636_2.00 		Arabidopsis thaliana
NNNNNNYCACCGACAHH
DDTGTCGGTGRNNNNNN		 Dap-seq
OMalley et al.(2016)
At4g16750_colamp_a 		0.726 0.900
ERF038
M06608_2.00 		Arabidopsis thaliana
NHNHHDYCRCCGACA
TGTCGGYGRHDDNDN		 Dap-seq
OMalley et al.(2016)
ERF38_col_a 		0.726 0.880
AT3G16280
M06618_2.00 		Arabidopsis thaliana
NDNCACCGACANHN
NDNTGTCGGTGNHN		 Dap-seq
OMalley et al.(2016)
AT3G16280_col_a 		0.725 0.860
AT3G16280
M06619_2.00 		Arabidopsis thaliana
BCACCGACAHWNNN
NNNWDTGTCGGTGV		 Dap-seq
OMalley et al.(2016)
AT3G16280_colamp_a 		0.725 0.860
ERF037
M00843_2.00 		Arabidopsis thaliana
NRCCGACRN
NYGTCGGYN		 PBM
Franco-Zorrilla et al.(2014)
At1g77200 		0.714 0.880
ERF037
M06599_2.00 		Arabidopsis thaliana
YCRCCGACAHHNNH
DNNDDTGTCGGYGR		 Dap-seq
OMalley et al.(2016)
AT1G77200_col_a 		0.714 0.880
ERF037
M06600_2.00 		Arabidopsis thaliana
NNYACCGACAHN
NDTGTCGGTRNN		 Dap-seq
OMalley et al.(2016)
AT1G77200_colamp_a 		0.714 0.880
Q3HS42_BRANA
M09739_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBIII4_01 		0.699 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM04G20760.1 AP2 62 113

Links

Other AP2 family TFs
Other Oryza glumaepatula TFs

445 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_02064 Aegilops tauschii F775_02064 N
F775_02400 Aegilops tauschii F775_02400 I
AMTR_s00019p00086450 Amborella trichopoda AMTR_s00019p00086450 I
Aquca_002_00506 Aquilegia coerulea Aquca_002_00506 I
Aquca_016_00348 Aquilegia coerulea Aquca_016_00348 I
Aquca_048_00034 Aquilegia coerulea Aquca_048_00034 I
Aquca_074_00065 Aquilegia coerulea Aquca_074_00065 I
ADAP Arabidopsis lyrata fgenesh2_kg.1__1760__AT1G16060.1 N
fgenesh2_kg.2__2276__AT1G79700.2 Arabidopsis lyrata fgenesh2_kg.2__2276__AT1G79700.2 I
ADAP Arabidopsis thaliana AT1G16060 I
AT1G79700 Arabidopsis thaliana AT1G79700 I
WRI1 Arabidopsis thaliana AT3G54320 I
Bostr.0697s0045 Boechera stricta Bostr.0697s0045 I
Bostr.20129s0410 Boechera stricta Bostr.20129s0410 I
Bostr.7128s0222 Boechera stricta Bostr.7128s0222 N
BRADI2G18570 Brachypodium distachyon BRADI2G18570 I
BRADI2G48130 Brachypodium distachyon BRADI2G48130 N
BRADI4G30617 Brachypodium distachyon BRADI4G30617 I
Bo5g021520 Brassica oleracea Bo5g021520 N
Bo6g067950 Brassica oleracea Bo6g067950 I
Bo8g083590 Brassica oleracea Bo8g083590 I
Bra026082 Brassica rapa Bra026082 I
Bra035137 Brassica rapa Bra035137 I
PK24809.1 Cannabis sativa PK24809.1 I
PK26651.1 Cannabis sativa PK26651.1 I
Cagra.0562s0024 Capsella grandiflora Cagra.0562s0024 I
Cagra.1725s0044 Capsella grandiflora Cagra.1725s0044 I
Carubv10018845m.g Capsella rubella Carubv10018845m.g I
evm.TU.contig_28586.3 Carica papaya evm.TU.contig_28586.3 N
evm.TU.supercontig_14.38 Carica papaya evm.TU.supercontig_14.38 N
evm.TU.supercontig_199.10 Carica papaya evm.TU.supercontig_199.10 I
Ciclev10013824m.g Citrus clementina Ciclev10013824m.g N
orange1.1g042319m.g Citrus sinensis orange1.1g042319m.g N
Cucsa.170790 Cucumis sativus Cucsa.170790 I
Eucgr.B03412 Eucalyptus grandis Eucgr.B03412 I
Eucgr.F03987 Eucalyptus grandis Eucgr.F03987 I
Eucgr.I01921 Eucalyptus grandis Eucgr.I01921 N
Eucgr.J02131 Eucalyptus grandis Eucgr.J02131 N
Thhalv10008118m.g Eutrema salsugineum Thhalv10008118m.g I
gene01262-v1.0-hybrid Fragaria vesca gene01262-v1.0-hybrid I
GLYMA07G02380 Glycine max GLYMA07G02380 I
GLYMA08G23630 Glycine max GLYMA08G23630 I
GLYMA08G40831 Glycine max GLYMA08G40831 N
GLYMA09G37540 Glycine max GLYMA09G37540 N
GLYMA18G16236 Glycine max GLYMA18G16236 N
GLYMA18G49101 Glycine max GLYMA18G49101 N
Gorai.001G256900 Gossypium raimondii Gorai.001G256900 N
Gorai.009G122000 Gossypium raimondii Gorai.009G122000 I
Gorai.012G056300 Gossypium raimondii Gorai.012G056300 N
Gorai.012G098200 Gossypium raimondii Gorai.012G098200 I
LPERR05G19870 Leersia perrieri LPERR05G19870 I
Lus10005253.g Linum usitatissimum Lus10005253.g N
Lus10013268.g Linum usitatissimum Lus10013268.g N
Lus10024101.g Linum usitatissimum Lus10024101.g I
Lus10030671.g Linum usitatissimum Lus10030671.g N
Lus10030792.g Linum usitatissimum Lus10030792.g N
Lus10036719.g Linum usitatissimum Lus10036719.g I
Lus10037209.g Linum usitatissimum Lus10037209.g I
Lus10041618.g Linum usitatissimum Lus10041618.g I
MDP0000186581 Malus domestica MDP0000186581 N
MDP0000206674 Malus domestica MDP0000206674 N
MDP0000281784 Malus domestica MDP0000281784 I
MDP0000297698 Malus domestica MDP0000297698 N
cassava39084.m1 Manihot esculenta cassava39084.m1 I
GSMUA_Achr3G03630_001 Musa acuminata GSMUA_Achr3G03630_001 I
OBART06G03040 Oryza barthii OBART06G03040 N
OB05G31600 Oryza brachyantha OB05G31600 I
OB09G17420 Oryza brachyantha OB09G17420 I
ORGLA06G0029800 Oryza glaberrima ORGLA06G0029800 N
ORGLA09G0079700 Oryza glaberrima ORGLA09G0079700 I
OGLUM09G11130 Oryza glumaepatula OGLUM09G11130 I
BGIOSGA017664 Oryza indica BGIOSGA017664 I
BGIOSGA021927 Oryza indica BGIOSGA021927 N
BGIOSGA030783 Oryza indica BGIOSGA030783 I
OLONG_014256 Oryza longistaminata OLONG_014256 I
OMERI01G26790 Oryza meridionalis OMERI01G26790 I
OMERI06G03270 Oryza meridionalis OMERI06G03270 N
ONIVA06G03970 Oryza nivara ONIVA06G03970 N
ONIVA09G10420 Oryza nivara ONIVA09G10420 I
OPUNC05G21440 Oryza punctata OPUNC05G21440 I
ORUFI06G03000 Oryza rufipogon ORUFI06G03000 N
OS05G0536250 Oryza sativa OS05G0536250 I
OS06G0145700 Oryza sativa OS06G0145700 N
OS09G0423800 Oryza sativa OS09G0423800 I
Pavir.Bb02213 Panicum virgatum Pavir.Bb02213 I
Pavir.J02216 Panicum virgatum Pavir.J02216 I
Pavir.J19507 Panicum virgatum Pavir.J19507 N
Pavir.J34675 Panicum virgatum Pavir.J34675 I
PDK_20s13009417g005 Phoenix dactylifera PDK_20s13009417g005 N
POPTR_0001s03300 Populus trichocarpa POPTR_0001s03300 I
Pm008629 Prunus mume Pm008629 I
PRUPE_ppa023152mg Prunus persica PRUPE_ppa023152mg I
SapurV1A.0153s0330 Salix purpurea SapurV1A.0153s0330 I
SapurV1A.1535s0040 Salix purpurea SapurV1A.1535s0040 I
SapurV1A.1603s0090 Salix purpurea SapurV1A.1603s0090 I
Si007857m.g Setaria italica Si007857m.g N
Si022186m.g Setaria italica Si022186m.g I
Si030129m.g Setaria italica Si030129m.g I
Solyc03g117720.2 Solanum lycopersicum Solyc03g117720.2 I
Solyc06g066390.1 Solanum lycopersicum Solyc06g066390.1 N
Solyc06g068570.2 Solanum lycopersicum Solyc06g068570.2 I
PGSC0003DMG400002399 Solanum tuberosum PGSC0003DMG400002399 N
Sb02g025080 Sorghum bicolor Sb02g025080 I
Sb09g026800 Sorghum bicolor Sb09g026800 I
Sb10g003160 Sorghum bicolor Sb10g003160 N
TCM_018386 Theobroma cacao TCM_018386 N
TCM_027569 Theobroma cacao TCM_027569 I
Traes_1BL_3EFA4A82D Triticum aestivum Traes_1BL_3EFA4A82D N
Traes_4AL_C863DCEDC Triticum aestivum Traes_4AL_C863DCEDC N
Traes_5BL_B6C71B544 Triticum aestivum Traes_5BL_B6C71B544 I
Traes_7AS_A70A185F1 Triticum aestivum Traes_7AS_A70A185F1 N
TRIUR3_01982 Triticum urartu TRIUR3_01982 I
VIT_09s0018g01650 Vitis vinifera VIT_09s0018g01650 I
GRMZM2G073982 Zea mays GRMZM2G073982 N
GRMZM2G113078 Zea mays GRMZM2G113078 I
GRMZM2G141219 Zea mays GRMZM2G141219 I