CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PDK_20s13009417g005
(
Phoenix dactylifera
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
PDK_20s13009417g005
T010331_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PDK_20s13009417g005
AP2
9
64
SRFRGVSRHRWTGRFEAHLWDKASWNVTQRKKGKQASLEEAAARAYDLAALKYWGP
PDK_20s13009417g005
AP2
106
158
SKYRGVAKHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAAHAYDIAAIEYRGI
Links
Other
AP2
family TFs
Other
Phoenix dactylifera
TFs
276 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_018386
Theobroma cacao
TCM_018386
N
0.873
Ciclev10013824m.g
Citrus clementina
Ciclev10013824m.g
N
0.873
Eucgr.J02131
Eucalyptus grandis
Eucgr.J02131
N
0.873
orange1.1g042319m.g
Citrus sinensis
orange1.1g042319m.g
N
0.873
Lus10005253.g
Linum usitatissimum
Lus10005253.g
N
0.867
Lus10030671.g
Linum usitatissimum
Lus10030671.g
N
0.867
Aquca_074_00065
Aquilegia coerulea
Aquca_074_00065
I
0.866
Si007857m.g
Setaria italica
Si007857m.g
N
0.860
Traes_7AS_A70A185F1
Triticum aestivum
Traes_7AS_A70A185F1
N
0.860
BGIOSGA021927
Oryza indica
BGIOSGA021927
N
0.857
GRMZM2G073982
Zea mays
GRMZM2G073982
N
0.857
OBART06G03040
Oryza barthii
OBART06G03040
N
0.857
ONIVA06G03970
Oryza nivara
ONIVA06G03970
N
0.857
ORGLA06G0029800
Oryza glaberrima
ORGLA06G0029800
N
0.857
ORUFI06G03000
Oryza rufipogon
ORUFI06G03000
N
0.857
Sb10g003160
Sorghum bicolor
Sb10g003160
N
0.857
gene01262-v1.0-hybrid
Fragaria vesca
gene01262-v1.0-hybrid
I
0.857
MDP0000206674
Malus domestica
MDP0000206674
N
0.857
Pavir.J19507
Panicum virgatum
Pavir.J19507
N
0.857
GLYMA18G16236
Glycine max
GLYMA18G16236
N
0.855
Eucgr.I01921
Eucalyptus grandis
Eucgr.I01921
N
0.855
GLYMA08G40831
Glycine max
GLYMA08G40831
N
0.854
GLYMA09G37540
Glycine max
GLYMA09G37540
N
0.854
BRADI2G48130
Brachypodium distachyon
BRADI2G48130
N
0.853
GLYMA18G49101
Glycine max
GLYMA18G49101
N
0.853
Solyc06g066390.1
Solanum lycopersicum
Solyc06g066390.1
N
0.853
PK24809.1
Cannabis sativa
PK24809.1
I
0.852
PGSC0003DMG400002399
Solanum tuberosum
PGSC0003DMG400002399
N
0.840
cassava39084.m1
Manihot esculenta
cassava39084.m1
I
0.839
Lus10036719.g
Linum usitatissimum
Lus10036719.g
I
0.838
Lus10037209.g
Linum usitatissimum
Lus10037209.g
I
0.838
MDP0000281784
Malus domestica
MDP0000281784
I
0.837
Bra026082
Brassica rapa
Bra026082
I
0.833
ADAP
Arabidopsis thaliana
AT1G16060
I
0.831
OS06G0145700
Oryza sativa
OS06G0145700
N
0.831
Traes_4AL_C863DCEDC
Triticum aestivum
Traes_4AL_C863DCEDC
N
0.831
Lus10013268.g
Linum usitatissimum
Lus10013268.g
N
0.831
Lus10030792.g
Linum usitatissimum
Lus10030792.g
N
0.831
Aquca_002_00506
Aquilegia coerulea
Aquca_002_00506
I
0.830
Thhalv10008118m.g
Eutrema salsugineum
Thhalv10008118m.g
I
0.830
Bra035137
Brassica rapa
Bra035137
I
0.828
Pavir.Bb02213
Panicum virgatum
Pavir.Bb02213
I
0.828
GRMZM2G113078
Zea mays
GRMZM2G113078
I
0.827
LPERR05G19870
Leersia perrieri
LPERR05G19870
I
0.827
OMERI01G26790
Oryza meridionalis
OMERI01G26790
I
0.827
Sb09g026800
Sorghum bicolor
Sb09g026800
I
0.827
Si022186m.g
Setaria italica
Si022186m.g
I
0.827
Pavir.J02216
Panicum virgatum
Pavir.J02216
I
0.827
Pavir.J34675
Panicum virgatum
Pavir.J34675
I
0.827
Bostr.20129s0410
Boechera stricta
Bostr.20129s0410
I
0.826
fgenesh2_kg.2__2276__AT1G79700.2
Arabidopsis lyrata
fgenesh2_kg.2__2276__AT1G79700.2
I
0.825
OMERI06G03270
Oryza meridionalis
OMERI06G03270
N
0.824
MDP0000186581
Malus domestica
MDP0000186581
N
0.824
MDP0000297698
Malus domestica
MDP0000297698
N
0.824
AT1G79700
Arabidopsis thaliana
AT1G79700
I
0.822
BGIOSGA030783
Oryza indica
BGIOSGA030783
I
0.822
BRADI4G30617
Brachypodium distachyon
BRADI4G30617
I
0.822
OB09G17420
Oryza brachyantha
OB09G17420
I
0.822
OGLUM09G11130
Oryza glumaepatula
OGLUM09G11130
I
0.822
ONIVA09G10420
Oryza nivara
ONIVA09G10420
I
0.822
ORGLA09G0079700
Oryza glaberrima
ORGLA09G0079700
I
0.822
OS09G0423800
Oryza sativa
OS09G0423800
I
0.822
Sb02g025080
Sorghum bicolor
Sb02g025080
I
0.822
Si030129m.g
Setaria italica
Si030129m.g
I
0.822
Traes_5BL_B6C71B544
Triticum aestivum
Traes_5BL_B6C71B544
I
0.822
GLYMA07G02380
Glycine max
GLYMA07G02380
I
0.821
GLYMA08G23630
Glycine max
GLYMA08G23630
I
0.821
Aquca_016_00348
Aquilegia coerulea
Aquca_016_00348
I
0.821
Gorai.009G122000
Gossypium raimondii
Gorai.009G122000
I
0.821
GSMUA_Achr3G03630_001
Musa acuminata
GSMUA_Achr3G03630_001
I
0.819
BGIOSGA028751
Oryza indica
BGIOSGA028751
I
0.818
Bo6g067950
Brassica oleracea
Bo6g067950
I
0.818
GRMZM2G141219
Zea mays
GRMZM2G141219
I
0.818
ORGLA08G0142100
Oryza glaberrima
ORGLA08G0142100
I
0.818
OS08G0442400
Oryza sativa
OS08G0442400
I
0.818
Solyc03g117720.2
Solanum lycopersicum
Solyc03g117720.2
I
0.818
Eucgr.F03987
Eucalyptus grandis
Eucgr.F03987
I
0.817
WRI1
Arabidopsis thaliana
AT3G54320
I
0.816
Bo8g083590
Brassica oleracea
Bo8g083590
I
0.816
BRADI2G18570
Brachypodium distachyon
BRADI2G18570
I
0.816
F775_02400
Aegilops tauschii
F775_02400
I
0.816
TRIUR3_01982
Triticum urartu
TRIUR3_01982
I
0.816
Bostr.0697s0045
Boechera stricta
Bostr.0697s0045
I
0.816
Cagra.0562s0024
Capsella grandiflora
Cagra.0562s0024
I
0.816
Carubv10018845m.g
Capsella rubella
Carubv10018845m.g
I
0.816
Cucsa.170790
Cucumis sativus
Cucsa.170790
I
0.815
AMTR_s00019p00086450
Amborella trichopoda
AMTR_s00019p00086450
I
0.814
POPTR_0001s03300
Populus trichocarpa
POPTR_0001s03300
I
0.813
Lus10041618.g
Linum usitatissimum
Lus10041618.g
I
0.813
SapurV1A.1535s0040
Salix purpurea
SapurV1A.1535s0040
I
0.813
SapurV1A.1603s0090
Salix purpurea
SapurV1A.1603s0090
I
0.813
PRUPE_ppa023152mg
Prunus persica
PRUPE_ppa023152mg
I
0.812
TCM_027569
Theobroma cacao
TCM_027569
I
0.812
VIT_09s0018g01650
Vitis vinifera
VIT_09s0018g01650
I
0.812
Pm008629
Prunus mume
Pm008629
I
0.812
Cagra.1725s0044
Capsella grandiflora
Cagra.1725s0044
I
0.812
evm.TU.supercontig_199.10
Carica papaya
evm.TU.supercontig_199.10
I
0.812
Gorai.012G098200
Gossypium raimondii
Gorai.012G098200
I
0.812
SapurV1A.0153s0330
Salix purpurea
SapurV1A.0153s0330
I
0.812
GRMZM2G124524
Zea mays
GRMZM2G124524
I
0.811
Sb05g001790
Sorghum bicolor
Sb05g001790
I
0.811
Aquca_048_00034
Aquilegia coerulea
Aquca_048_00034
I
0.811
Ciclev10025985m.g
Citrus clementina
Ciclev10025985m.g
I
0.811
Gorai.001G256900
Gossypium raimondii
Gorai.001G256900
N
0.811
orange1.1g018990m.g
Citrus sinensis
orange1.1g018990m.g
I
0.811
TCM_044588
Theobroma cacao
TCM_044588
I
0.810
GLYMA02G36880
Glycine max
GLYMA02G36880
I
0.809
GLYMA17G07860
Glycine max
GLYMA17G07860
I
0.809
PK26651.1
Cannabis sativa
PK26651.1
I
0.809
chr2.CM0608.630.nc
Lotus japonicus
chr2.CM0608.630.nc
N
0.809
evm.TU.supercontig_14.38
Carica papaya
evm.TU.supercontig_14.38
N
0.808
Lus10024101.g
Linum usitatissimum
Lus10024101.g
I
0.808
PK04008.1
Cannabis sativa
PK04008.1
I
0.808
Bo5g021520
Brassica oleracea
Bo5g021520
N
0.807
MTR_8g468920
Medicago truncatula
MTR_8g468920
N
0.807
Gorai.011G225700
Gossypium raimondii
Gorai.011G225700
I
0.806
ADAP
Arabidopsis lyrata
fgenesh2_kg.1__1760__AT1G16060.1
N
0.805
Bostr.7128s0222
Boechera stricta
Bostr.7128s0222
N
0.805
VIT_01s0026g01690
Vitis vinifera
VIT_01s0026g01690
N
0.803
Ca_20689
Cicer arietinum
Ca_20689
N
0.803
OB05G31600
Oryza brachyantha
OB05G31600
I
0.800
mgf019814m
Mimulus guttatus
mgf019814m
N
0.800
Eucgr.B03412
Eucalyptus grandis
Eucgr.B03412
I
0.800
evm.TU.contig_28586.3
Carica papaya
evm.TU.contig_28586.3
N
0.800
Solyc06g068570.2
Solanum lycopersicum
Solyc06g068570.2
I
0.799
Cucsa.282940
Cucumis sativus
Cucsa.282940
N
0.799
AMTR_s00202p00017170
Amborella trichopoda
AMTR_s00202p00017170
N
0.798
MTR_7g009410
Medicago truncatula
MTR_7g009410
N
0.798
POPTR_0010s10290
Populus trichocarpa
POPTR_0010s10290
N
0.798
PRUPE_ppa022978mg
Prunus persica
PRUPE_ppa022978mg
N
0.798
Cla017294
Citrullus lanatus
Cla017294
N
0.798
Pm015847
Prunus mume
Pm015847
N
0.798
AMTR_s00101p00022740
Amborella trichopoda
AMTR_s00101p00022740
N
0.797
Bo6g124080
Brassica oleracea
Bo6g124080
N
0.797
Carubv10010918m.g
Capsella rubella
Carubv10010918m.g
N
0.796
mg013664m
Mimulus guttatus
mg013664m
N
0.795
Gorai.006G025100
Gossypium raimondii
Gorai.006G025100
N
0.795
Gorai.009G008800
Gossypium raimondii
Gorai.009G008800
I
0.795
F775_02064
Aegilops tauschii
F775_02064
N
0.794
LPERR09G07570
Leersia perrieri
LPERR09G07570
N
0.794
OBART09G10730
Oryza barthii
OBART09G10730
N
0.794
OLONG_002862
Oryza longistaminata
OLONG_002862
N
0.794
OMERI09G08520
Oryza meridionalis
OMERI09G08520
N
0.794
ORUFI09G11510
Oryza rufipogon
ORUFI09G11510
N
0.794
POPTR_0017s11470
Populus trichocarpa
POPTR_0017s11470
N
0.794
PRUPE_ppa024318mg
Prunus persica
PRUPE_ppa024318mg
N
0.794
SELMODRAFT_85823
Selaginella moellendorffii
SELMODRAFT_85823
N
0.794
VIT_14s0108g00050
Vitis vinifera
VIT_14s0108g00050
N
0.794
29822.m003477
Ricinus communis
29822.m003477
N
0.794
cassava11368.m1
Manihot esculenta
cassava11368.m1
N
0.794
Carubv10020688m.g
Capsella rubella
Carubv10020688m.g
N
0.792
GSMUA_Achr8G09350_001
Musa acuminata
GSMUA_Achr8G09350_001
I
0.791
MTR_6g011490
Medicago truncatula
MTR_6g011490
N
0.791
PRUPE_ppa022243mg
Prunus persica
PRUPE_ppa022243mg
N
0.791
Pm006561
Prunus mume
Pm006561
N
0.791
MTR_2g460730
Medicago truncatula
MTR_2g460730
N
0.790
POPTR_0018s11110
Populus trichocarpa
POPTR_0018s11110
N
0.790
Ciclev10010237m.g
Citrus clementina
Ciclev10010237m.g
N
0.790
Gorai.008G182500
Gossypium raimondii
Gorai.008G182500
N
0.790
Lus10001553.g
Linum usitatissimum
Lus10001553.g
N
0.790
chr6.CM0041.30.nd
Lotus japonicus
chr6.CM0041.30.nd
N
0.790
GSMUA_Achr5G04670_001
Musa acuminata
GSMUA_Achr5G04670_001
N
0.789
PRUPE_ppa007768mg
Prunus persica
PRUPE_ppa007768mg
N
0.789
Cla019044
Citrullus lanatus
Cla019044
N
0.789
Pm013856
Prunus mume
Pm013856
N
0.789
evm.TU.supercontig_54.28
Carica papaya
evm.TU.supercontig_54.28
N
0.788
gene15913-v1.0-hybrid
Fragaria vesca
gene15913-v1.0-hybrid
N
0.788
MDP0000231748
Malus domestica
MDP0000231748
N
0.788
BGIOSGA017664
Oryza indica
BGIOSGA017664
I
0.787
OLONG_014256
Oryza longistaminata
OLONG_014256
I
0.787
OPUNC05G21440
Oryza punctata
OPUNC05G21440
I
0.787
OS05G0536250
Oryza sativa
OS05G0536250
I
0.787
Ca_10533
Cicer arietinum
Ca_10533
N
0.787
Ciclev10003896m.g
Citrus clementina
Ciclev10003896m.g
N
0.787
orange1.1g036423m.g
Citrus sinensis
orange1.1g036423m.g
N
0.787
GLYMA06G30840
Glycine max
GLYMA06G30840
N
0.786
MTR_4g130270
Medicago truncatula
MTR_4g130270
I
0.786
TCM_038442
Theobroma cacao
TCM_038442
N
0.786
gene27659-v1.0-hybrid
Fragaria vesca
gene27659-v1.0-hybrid
N
0.786
MDP0000133423
Malus domestica
MDP0000133423
N
0.786
MDP0000318457
Malus domestica
MDP0000318457
N
0.786
Bra003178
Brassica rapa
Bra003178
N
0.785
GLYMA04G24010
Glycine max
GLYMA04G24010
N
0.785
MTR_4g007770
Medicago truncatula
MTR_4g007770
N
0.785
Ca_17532
Cicer arietinum
Ca_17532
N
0.785
WRI1
Arabidopsis lyrata
fgenesh2_kg.5__1822__AT3G54320.1
N
0.784
Pm017032
Prunus mume
Pm017032
N
0.784
30069.m000440
Ricinus communis
30069.m000440
N
0.784
Gorai.012G056300
Gossypium raimondii
Gorai.012G056300
N
0.784
Thhalv10010394m.g
Eutrema salsugineum
Thhalv10010394m.g
N
0.784
Bra007066
Brassica rapa
Bra007066
N
0.783
LPERR08G13500
Leersia perrieri
LPERR08G13500
N
0.783
OGLUM08G17060
Oryza glumaepatula
OGLUM08G17060
N
0.783
OMERI08G13500
Oryza meridionalis
OMERI08G13500
N
0.783
ONIVA08G17820
Oryza nivara
ONIVA08G17820
N
0.783
ORUFI08G18170
Oryza rufipogon
ORUFI08G18170
N
0.783
TCM_011797
Theobroma cacao
TCM_011797
N
0.783
cassava16315.m1
Manihot esculenta
cassava16315.m1
N
0.783
OPUNC09G09320
Oryza punctata
OPUNC09G09320
N
0.782
VIT_11s0037g00870
Vitis vinifera
VIT_11s0037g00870
N
0.782
Cla015555
Citrullus lanatus
Cla015555
N
0.782
Eucgr.J00316
Eucalyptus grandis
Eucgr.J00316
I
0.782
mgf008907m
Mimulus guttatus
mgf008907m
I
0.781
SELMODRAFT_129793
Selaginella moellendorffii
SELMODRAFT_129793
N
0.780
Gorai.013G003400
Gossypium raimondii
Gorai.013G003400
I
0.780
POPTR_0003s18350
Populus trichocarpa
POPTR_0003s18350
N
0.779
Si012026m.g
Setaria italica
Si012026m.g
N
0.779
Si026433m.g
Setaria italica
Si026433m.g
N
0.779
Solyc01g096860.1
Solanum lycopersicum
Solyc01g096860.1
I
0.779
Cucsa.106090
Cucumis sativus
Cucsa.106090
N
0.779
GRMZM2G174834
Zea mays
GRMZM2G174834
I
0.777
MTR_8g044040
Medicago truncatula
MTR_8g044040
N
0.777
OPUNC08G14310
Oryza punctata
OPUNC08G14310
N
0.777
Traes_5AL_F8DEBE8E7
Triticum aestivum
Traes_5AL_F8DEBE8E7
I
0.776
Traes_5DL_2CF55DD05
Triticum aestivum
Traes_5DL_2CF55DD05
I
0.776
30114.m000507
Ricinus communis
30114.m000507
N
0.775
BRADI4G43877
Brachypodium distachyon
BRADI4G43877
I
0.773
OB11G11380
Oryza brachyantha
OB11G11380
I
0.772
OB12G11690
Oryza brachyantha
OB12G11690
I
0.772
ORGLA11G0014900
Oryza glaberrima
ORGLA11G0014900
I
0.772
OS12G0126300
Oryza sativa
OS12G0126300
I
0.772
Cla020765
Citrullus lanatus
Cla020765
N
0.772
chr2.CM0225.20.nc
Lotus japonicus
chr2.CM0225.20.nc
N
0.771
MTR_8g044070
Medicago truncatula
MTR_8g044070
N
0.770
Traes_1BL_3EFA4A82D
Triticum aestivum
Traes_1BL_3EFA4A82D
N
0.769
Ciclev10033673m.g
Citrus clementina
Ciclev10033673m.g
N
0.768
SapurV1A.0036s0830
Salix purpurea
SapurV1A.0036s0830
N
0.765
SELMODRAFT_78076
Selaginella moellendorffii
SELMODRAFT_78076
N
0.764
e_gw1.32.189.1
Physcomitrella patens
e_gw1.32.189.1
N
0.763
Eucgr.C00238
Eucalyptus grandis
Eucgr.C00238
N
0.763
orange1.1g043551m.g
Citrus sinensis
orange1.1g043551m.g
N
0.762
Ca_03306
Cicer arietinum
Ca_03306
N
0.760
GLYMA08G24420
Glycine max
GLYMA08G24420
N
0.759
Solyc12g010490.1
Solanum lycopersicum
Solyc12g010490.1
N
0.757
mgf017413m
Mimulus guttatus
mgf017413m
N
0.757
GLYMA15G34770
Glycine max
GLYMA15G34770
N
0.756
Pm015843
Prunus mume
Pm015843
N
0.756
mgf019116m
Mimulus guttatus
mgf019116m
N
0.754
gene00377-v1.0-hybrid
Fragaria vesca
gene00377-v1.0-hybrid
N
0.752
TRIUR3_24036
Triticum urartu
TRIUR3_24036
N
0.750
Thhalv10018877m.g
Eutrema salsugineum
Thhalv10018877m.g
N
0.750
Cagra.2238s0017
Capsella grandiflora
Cagra.2238s0017
N
0.746
Lus10028880.g
Linum usitatissimum
Lus10028880.g
N
0.746
Lus10008939.g
Linum usitatissimum
Lus10008939.g
N
0.745
PGSC0003DMG400027502
Solanum tuberosum
PGSC0003DMG400027502
N
0.743
BGIOSGA034580
Oryza indica
BGIOSGA034580
N
0.742
BGIOSGA036704
Oryza indica
BGIOSGA036704
N
0.742
OMERI11G02080
Oryza meridionalis
OMERI11G02080
N
0.742
OMERI12G00060
Oryza meridionalis
OMERI12G00060
N
0.742
ONIVA03G39530
Oryza nivara
ONIVA03G39530
N
0.742
ONIVA11G01800
Oryza nivara
ONIVA11G01800
N
0.742
OPUNC11G01540
Oryza punctata
OPUNC11G01540
N
0.742
OPUNC12G01560
Oryza punctata
OPUNC12G01560
N
0.742
ORGLA12G0015400
Oryza glaberrima
ORGLA12G0015400
N
0.742
F775_06373
Aegilops tauschii
F775_06373
N
0.739
BRADI3G36820
Brachypodium distachyon
BRADI3G36820
N
0.736
WRI1
Vitis vinifera
VIT_13s0047g00340
N
0.733
POPTR_0010s25340
Populus trichocarpa
POPTR_0010s25340
N
0.729
OBART12G01740
Oryza barthii
OBART12G01740
N
0.728
POPTR_0006s19360
Populus trichocarpa
POPTR_0006s19360
N
0.727
LPERR12G01610
Leersia perrieri
LPERR12G01610
N
0.726
Sb07g021800
Sorghum bicolor
Sb07g021800
N
0.726
GRMZM2G131266
Zea mays
GRMZM2G131266
N
0.724
Si013842m.g
Setaria italica
Si013842m.g
N
0.721
TRIUR3_04644
Triticum urartu
TRIUR3_04644
N
0.721
OPUNC06G02740
Oryza punctata
OPUNC06G02740
N
0.715
MDP0000166059
Malus domestica
MDP0000166059
N
0.710
PDK_20s1726381g002
Phoenix dactylifera
PDK_20s1726381g002
N
0.709
GSMUA_Achr3G32510_001
Musa acuminata
GSMUA_Achr3G32510_001
N
0.707
SapurV1A.0070s0630
Salix purpurea
SapurV1A.0070s0630
N
0.702
Pavir.J08481
Panicum virgatum
Pavir.J08481
N
0.697
Pavir.J34903
Panicum virgatum
Pavir.J34903
N
0.697
e_gw1.261.8.1
Physcomitrella patens
e_gw1.261.8.1
N
0.695
Pavir.Ba03911
Panicum virgatum
Pavir.Ba03911
I
0.685
SELMODRAFT_108361
Selaginella moellendorffii
SELMODRAFT_108361
N
0.684
POPTR_0008s01260
Populus trichocarpa
POPTR_0008s01260
N
0.683