chr2.CM0608.630.nc (Lotus japonicus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 chr2.CM0608.630.nc T010171_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr2.CM0608.630.nc AP2 65 122
chr2.CM0608.630.nc AP2 164 216

Links

Other AP2 family TFs
Other Lotus japonicus TFs

287 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_8g468920 Medicago truncatula MTR_8g468920 N 0.919
POPTR_0010s10290 Populus trichocarpa POPTR_0010s10290 N 0.883
Gorai.008G182500 Gossypium raimondii Gorai.008G182500 N 0.882
MTR_7g009410 Medicago truncatula MTR_7g009410 N 0.881
PRUPE_ppa022978mg Prunus persica PRUPE_ppa022978mg N 0.881
Pm015847 Prunus mume Pm015847 N 0.881
evm.TU.supercontig_14.38 Carica papaya evm.TU.supercontig_14.38 N 0.880
Ca_20689 Cicer arietinum Ca_20689 N 0.879
PRUPE_ppa022243mg Prunus persica PRUPE_ppa022243mg N 0.877
Pm006561 Prunus mume Pm006561 N 0.877
Gorai.009G122000 Gossypium raimondii Gorai.009G122000 I 0.877
TCM_011797 Theobroma cacao TCM_011797 N 0.875
Gorai.001G256900 Gossypium raimondii Gorai.001G256900 N 0.875
AMTR_s00202p00017170 Amborella trichopoda AMTR_s00202p00017170 N 0.872
mgf019814m Mimulus guttatus mgf019814m N 0.867
Ca_10533 Cicer arietinum Ca_10533 N 0.864
POPTR_0017s11470 Populus trichocarpa POPTR_0017s11470 N 0.863
PRUPE_ppa024318mg Prunus persica PRUPE_ppa024318mg N 0.863
29822.m003477 Ricinus communis 29822.m003477 N 0.863
VIT_14s0108g00050 Vitis vinifera VIT_14s0108g00050 N 0.861
Gorai.006G025100 Gossypium raimondii Gorai.006G025100 N 0.859
mg013664m Mimulus guttatus mg013664m N 0.857
MTR_6g011490 Medicago truncatula MTR_6g011490 N 0.855
cassava11368.m1 Manihot esculenta cassava11368.m1 N 0.854
Ciclev10033673m.g Citrus clementina Ciclev10033673m.g N 0.854
Gorai.012G056300 Gossypium raimondii Gorai.012G056300 N 0.853
VIT_01s0026g01690 Vitis vinifera VIT_01s0026g01690 N 0.848
VIT_11s0037g00870 Vitis vinifera VIT_11s0037g00870 N 0.848
MTR_8g044040 Medicago truncatula MTR_8g044040 N 0.844
chr2.CM0225.20.nc Lotus japonicus chr2.CM0225.20.nc N 0.841
SELMODRAFT_129793 Selaginella moellendorffii SELMODRAFT_129793 N 0.840
Ciclev10013824m.g Citrus clementina Ciclev10013824m.g N 0.840
Eucgr.J02131 Eucalyptus grandis Eucgr.J02131 N 0.840
orange1.1g042319m.g Citrus sinensis orange1.1g042319m.g N 0.840
BRADI2G48130 Brachypodium distachyon BRADI2G48130 N 0.835
TCM_018386 Theobroma cacao TCM_018386 N 0.835
GRMZM2G124524 Zea mays GRMZM2G124524 I 0.833
Si007857m.g Setaria italica Si007857m.g N 0.832
Traes_7AS_A70A185F1 Triticum aestivum Traes_7AS_A70A185F1 N 0.832
Si012026m.g Setaria italica Si012026m.g N 0.830
Si026433m.g Setaria italica Si026433m.g N 0.830
BGIOSGA021927 Oryza indica BGIOSGA021927 N 0.829
GLYMA18G16236 Glycine max GLYMA18G16236 N 0.829
GRMZM2G073982 Zea mays GRMZM2G073982 N 0.829
OBART06G03040 Oryza barthii OBART06G03040 N 0.829
ONIVA06G03970 Oryza nivara ONIVA06G03970 N 0.829
ORGLA06G0029800 Oryza glaberrima ORGLA06G0029800 N 0.829
ORUFI06G03000 Oryza rufipogon ORUFI06G03000 N 0.829
Sb10g003160 Sorghum bicolor Sb10g003160 N 0.829
Pavir.J19507 Panicum virgatum Pavir.J19507 N 0.829
SELMODRAFT_85823 Selaginella moellendorffii SELMODRAFT_85823 N 0.828
Lus10005253.g Linum usitatissimum Lus10005253.g N 0.828
Lus10030671.g Linum usitatissimum Lus10030671.g N 0.828
Solyc06g066390.1 Solanum lycopersicum Solyc06g066390.1 N 0.827
orange1.1g043551m.g Citrus sinensis orange1.1g043551m.g N 0.827
GLYMA08G40831 Glycine max GLYMA08G40831 N 0.826
cassava39084.m1 Manihot esculenta cassava39084.m1 I 0.826
Pm015843 Prunus mume Pm015843 N 0.825
SELMODRAFT_78076 Selaginella moellendorffii SELMODRAFT_78076 N 0.824
Lus10036719.g Linum usitatissimum Lus10036719.g I 0.824
Lus10037209.g Linum usitatissimum Lus10037209.g I 0.824
GLYMA08G23630 Glycine max GLYMA08G23630 I 0.823
MTR_4g007770 Medicago truncatula MTR_4g007770 N 0.823
Ca_17532 Cicer arietinum Ca_17532 N 0.823
gene01262-v1.0-hybrid Fragaria vesca gene01262-v1.0-hybrid I 0.823
Eucgr.I01921 Eucalyptus grandis Eucgr.I01921 N 0.822
GLYMA09G37540 Glycine max GLYMA09G37540 N 0.821
Bra035137 Brassica rapa Bra035137 I 0.820
cassava16315.m1 Manihot esculenta cassava16315.m1 N 0.819
PK24809.1 Cannabis sativa PK24809.1 I 0.819
Bo6g124080 Brassica oleracea Bo6g124080 N 0.818
GLYMA18G49101 Glycine max GLYMA18G49101 N 0.818
MDP0000186581 Malus domestica MDP0000186581 N 0.818
MDP0000297698 Malus domestica MDP0000297698 N 0.818
Aquca_074_00065 Aquilegia coerulea Aquca_074_00065 I 0.817
evm.TU.supercontig_54.28 Carica papaya evm.TU.supercontig_54.28 N 0.817
Lus10030792.g Linum usitatissimum Lus10030792.g N 0.817
MDP0000281784 Malus domestica MDP0000281784 I 0.817
Sb05g001790 Sorghum bicolor Sb05g001790 I 0.816
Bra003178 Brassica rapa Bra003178 N 0.815
Bra007066 Brassica rapa Bra007066 N 0.815
Sb07g021800 Sorghum bicolor Sb07g021800 N 0.815
Bostr.20129s0410 Boechera stricta Bostr.20129s0410 I 0.815
WRI1 Arabidopsis lyrata fgenesh2_kg.5__1822__AT3G54320.1 N 0.814
PGSC0003DMG400002399 Solanum tuberosum PGSC0003DMG400002399 N 0.814
Pm017032 Prunus mume Pm017032 N 0.814
30069.m000440 Ricinus communis 30069.m000440 N 0.814
evm.TU.contig_28586.3 Carica papaya evm.TU.contig_28586.3 N 0.814
Thhalv10010394m.g Eutrema salsugineum Thhalv10010394m.g N 0.814
fgenesh2_kg.2__2276__AT1G79700.2 Arabidopsis lyrata fgenesh2_kg.2__2276__AT1G79700.2 I 0.813
LPERR08G13500 Leersia perrieri LPERR08G13500 N 0.812
OGLUM08G17060 Oryza glumaepatula OGLUM08G17060 N 0.812
OMERI08G13500 Oryza meridionalis OMERI08G13500 N 0.812
ONIVA08G17820 Oryza nivara ONIVA08G17820 N 0.812
ORUFI08G18170 Oryza rufipogon ORUFI08G18170 N 0.812
BRADI4G30617 Brachypodium distachyon BRADI4G30617 I 0.811
Traes_5BL_B6C71B544 Triticum aestivum Traes_5BL_B6C71B544 I 0.811
Lus10013268.g Linum usitatissimum Lus10013268.g N 0.811
AMTR_s00101p00022740 Amborella trichopoda AMTR_s00101p00022740 N 0.809
GRMZM2G131266 Zea mays GRMZM2G131266 N 0.809
Si013842m.g Setaria italica Si013842m.g N 0.809
Ciclev10003896m.g Citrus clementina Ciclev10003896m.g N 0.809
MDP0000206674 Malus domestica MDP0000206674 N 0.809
orange1.1g036423m.g Citrus sinensis orange1.1g036423m.g N 0.809
PDK_20s13009417g005 Phoenix dactylifera PDK_20s13009417g005 N 0.809
GLYMA08G24420 Glycine max GLYMA08G24420 N 0.808
LPERR09G07570 Leersia perrieri LPERR09G07570 N 0.808
AT1G79700 Arabidopsis thaliana AT1G79700 I 0.807
GRMZM2G113078 Zea mays GRMZM2G113078 I 0.807
LPERR05G19870 Leersia perrieri LPERR05G19870 I 0.807
OMERI01G26790 Oryza meridionalis OMERI01G26790 I 0.807
OPUNC08G14310 Oryza punctata OPUNC08G14310 N 0.807
Sb09g026800 Sorghum bicolor Sb09g026800 I 0.807
Si022186m.g Setaria italica Si022186m.g I 0.807
Pavir.Bb02213 Panicum virgatum Pavir.Bb02213 I 0.807
Pavir.J02216 Panicum virgatum Pavir.J02216 I 0.807
Pavir.J34675 Panicum virgatum Pavir.J34675 I 0.807
Carubv10020688m.g Capsella rubella Carubv10020688m.g N 0.806
BGIOSGA030783 Oryza indica BGIOSGA030783 I 0.805
GLYMA15G34770 Glycine max GLYMA15G34770 N 0.805
OB09G17420 Oryza brachyantha OB09G17420 I 0.805
OGLUM09G11130 Oryza glumaepatula OGLUM09G11130 I 0.805
ONIVA09G10420 Oryza nivara ONIVA09G10420 I 0.805
ORGLA09G0079700 Oryza glaberrima ORGLA09G0079700 I 0.805
OS09G0423800 Oryza sativa OS09G0423800 I 0.805
Sb02g025080 Sorghum bicolor Sb02g025080 I 0.805
Si030129m.g Setaria italica Si030129m.g I 0.805
Cla019044 Citrullus lanatus Cla019044 N 0.805
GLYMA07G02380 Glycine max GLYMA07G02380 I 0.804
GSMUA_Achr5G04670_001 Musa acuminata GSMUA_Achr5G04670_001 N 0.804
OLONG_002862 Oryza longistaminata OLONG_002862 N 0.804
PRUPE_ppa007768mg Prunus persica PRUPE_ppa007768mg N 0.804
Pm013856 Prunus mume Pm013856 N 0.804
Cucsa.170790 Cucumis sativus Cucsa.170790 I 0.804
e_gw1.32.189.1 Physcomitrella patens e_gw1.32.189.1 N 0.804
gene00377-v1.0-hybrid Fragaria vesca gene00377-v1.0-hybrid N 0.804
OBART09G10730 Oryza barthii OBART09G10730 N 0.803
OMERI09G08520 Oryza meridionalis OMERI09G08520 N 0.803
ORUFI09G11510 Oryza rufipogon ORUFI09G11510 N 0.803
OS06G0145700 Oryza sativa OS06G0145700 N 0.803
Traes_4AL_C863DCEDC Triticum aestivum Traes_4AL_C863DCEDC N 0.803
AMTR_s00019p00086450 Amborella trichopoda AMTR_s00019p00086450 I 0.802
GLYMA06G30840 Glycine max GLYMA06G30840 N 0.802
MTR_2g460730 Medicago truncatula MTR_2g460730 N 0.802
POPTR_0001s03300 Populus trichocarpa POPTR_0001s03300 I 0.802
POPTR_0018s11110 Populus trichocarpa POPTR_0018s11110 N 0.802
Solyc03g117720.2 Solanum lycopersicum Solyc03g117720.2 I 0.802
TCM_038442 Theobroma cacao TCM_038442 N 0.802
Ciclev10010237m.g Citrus clementina Ciclev10010237m.g N 0.802
gene15913-v1.0-hybrid Fragaria vesca gene15913-v1.0-hybrid N 0.802
gene27659-v1.0-hybrid Fragaria vesca gene27659-v1.0-hybrid N 0.802
Lus10001553.g Linum usitatissimum Lus10001553.g N 0.802
MDP0000133423 Malus domestica MDP0000133423 N 0.802
MDP0000231748 Malus domestica MDP0000231748 N 0.802
MDP0000318457 Malus domestica MDP0000318457 N 0.802
SapurV1A.1535s0040 Salix purpurea SapurV1A.1535s0040 I 0.802
SapurV1A.1603s0090 Salix purpurea SapurV1A.1603s0090 I 0.802
chr6.CM0041.30.nd Lotus japonicus chr6.CM0041.30.nd N 0.802
Bo5g021520 Brassica oleracea Bo5g021520 N 0.801
BRADI2G18570 Brachypodium distachyon BRADI2G18570 I 0.801
F775_02400 Aegilops tauschii F775_02400 I 0.801
GLYMA04G24010 Glycine max GLYMA04G24010 N 0.801
GRMZM2G141219 Zea mays GRMZM2G141219 I 0.801
MTR_8g044070 Medicago truncatula MTR_8g044070 N 0.801
PRUPE_ppa023152mg Prunus persica PRUPE_ppa023152mg I 0.801
TCM_027569 Theobroma cacao TCM_027569 I 0.801
TRIUR3_01982 Triticum urartu TRIUR3_01982 I 0.801
VIT_09s0018g01650 Vitis vinifera VIT_09s0018g01650 I 0.801
Cla020765 Citrullus lanatus Cla020765 N 0.801
Pm008629 Prunus mume Pm008629 I 0.801
Eucgr.F03987 Eucalyptus grandis Eucgr.F03987 I 0.801
evm.TU.supercontig_199.10 Carica papaya evm.TU.supercontig_199.10 I 0.801
Gorai.012G098200 Gossypium raimondii Gorai.012G098200 I 0.801
SapurV1A.0153s0330 Salix purpurea SapurV1A.0153s0330 I 0.801
Bra026082 Brassica rapa Bra026082 I 0.800
Cla015555 Citrullus lanatus Cla015555 N 0.800
Aquca_048_00034 Aquilegia coerulea Aquca_048_00034 I 0.800
Lus10024101.g Linum usitatissimum Lus10024101.g I 0.800
Lus10041618.g Linum usitatissimum Lus10041618.g I 0.800
ADAP Arabidopsis lyrata fgenesh2_kg.1__1760__AT1G16060.1 N 0.799
Bostr.7128s0222 Boechera stricta Bostr.7128s0222 N 0.799
ADAP Arabidopsis thaliana AT1G16060 I 0.798
Cagra.1725s0044 Capsella grandiflora Cagra.1725s0044 I 0.798
GSMUA_Achr3G03630_001 Musa acuminata GSMUA_Achr3G03630_001 I 0.797
Cucsa.106090 Cucumis sativus Cucsa.106090 N 0.797
Thhalv10008118m.g Eutrema salsugineum Thhalv10008118m.g I 0.797
BGIOSGA034580 Oryza indica BGIOSGA034580 N 0.796
BGIOSGA036704 Oryza indica BGIOSGA036704 N 0.796
OMERI06G03270 Oryza meridionalis OMERI06G03270 N 0.796
OMERI11G02080 Oryza meridionalis OMERI11G02080 N 0.796
OMERI12G00060 Oryza meridionalis OMERI12G00060 N 0.796
ONIVA03G39530 Oryza nivara ONIVA03G39530 N 0.796
ONIVA11G01800 Oryza nivara ONIVA11G01800 N 0.796
OPUNC11G01540 Oryza punctata OPUNC11G01540 N 0.796
OPUNC12G01560 Oryza punctata OPUNC12G01560 N 0.796
ORGLA12G0015400 Oryza glaberrima ORGLA12G0015400 N 0.796
30114.m000507 Ricinus communis 30114.m000507 N 0.796
Bo6g067950 Brassica oleracea Bo6g067950 I 0.795
Ciclev10025985m.g Citrus clementina Ciclev10025985m.g I 0.795
orange1.1g018990m.g Citrus sinensis orange1.1g018990m.g I 0.795
PK26651.1 Cannabis sativa PK26651.1 I 0.795
WRI1 Arabidopsis thaliana AT3G54320 I 0.794
Bo8g083590 Brassica oleracea Bo8g083590 I 0.794
GLYMA02G36880 Glycine max GLYMA02G36880 I 0.794
GLYMA17G07860 Glycine max GLYMA17G07860 I 0.794
Bostr.0697s0045 Boechera stricta Bostr.0697s0045 I 0.794
Cagra.0562s0024 Capsella grandiflora Cagra.0562s0024 I 0.794
Carubv10018845m.g Capsella rubella Carubv10018845m.g I 0.794
BGIOSGA028751 Oryza indica BGIOSGA028751 I 0.793
ORGLA08G0142100 Oryza glaberrima ORGLA08G0142100 I 0.793
OS08G0442400 Oryza sativa OS08G0442400 I 0.793
Aquca_016_00348 Aquilegia coerulea Aquca_016_00348 I 0.793
PK04008.1 Cannabis sativa PK04008.1 I 0.792
OPUNC09G09320 Oryza punctata OPUNC09G09320 N 0.791
Carubv10010918m.g Capsella rubella Carubv10010918m.g N 0.790
Gorai.011G225700 Gossypium raimondii Gorai.011G225700 I 0.790
TCM_044588 Theobroma cacao TCM_044588 I 0.789
Lus10008939.g Linum usitatissimum Lus10008939.g N 0.789
Aquca_002_00506 Aquilegia coerulea Aquca_002_00506 I 0.786
Eucgr.B03412 Eucalyptus grandis Eucgr.B03412 I 0.786
LPERR12G01610 Leersia perrieri LPERR12G01610 N 0.785
Gorai.009G008800 Gossypium raimondii Gorai.009G008800 I 0.784
Lus10028880.g Linum usitatissimum Lus10028880.g N 0.784
GRMZM2G174834 Zea mays GRMZM2G174834 I 0.783
OBART12G01740 Oryza barthii OBART12G01740 N 0.782
OB05G31600 Oryza brachyantha OB05G31600 I 0.780
Solyc06g068570.2 Solanum lycopersicum Solyc06g068570.2 I 0.780
TRIUR3_24036 Triticum urartu TRIUR3_24036 N 0.780
Cucsa.282940 Cucumis sativus Cucsa.282940 N 0.778
Eucgr.C00238 Eucalyptus grandis Eucgr.C00238 N 0.777
PGSC0003DMG400027502 Solanum tuberosum PGSC0003DMG400027502 N 0.773
Solyc12g010490.1 Solanum lycopersicum Solyc12g010490.1 N 0.773
Cla017294 Citrullus lanatus Cla017294 N 0.773
Ca_03306 Cicer arietinum Ca_03306 N 0.772
mgf017413m Mimulus guttatus mgf017413m N 0.772
BRADI3G36820 Brachypodium distachyon BRADI3G36820 N 0.771
MTR_4g130270 Medicago truncatula MTR_4g130270 I 0.771
Thhalv10018877m.g Eutrema salsugineum Thhalv10018877m.g N 0.771
F775_06373 Aegilops tauschii F775_06373 N 0.770
POPTR_0003s18350 Populus trichocarpa POPTR_0003s18350 N 0.768
BGIOSGA017664 Oryza indica BGIOSGA017664 I 0.767
OLONG_014256 Oryza longistaminata OLONG_014256 I 0.767
OPUNC05G21440 Oryza punctata OPUNC05G21440 I 0.767
OS05G0536250 Oryza sativa OS05G0536250 I 0.767
F775_02064 Aegilops tauschii F775_02064 N 0.766
mgf019116m Mimulus guttatus mgf019116m N 0.766
POPTR_0010s25340 Populus trichocarpa POPTR_0010s25340 N 0.764
WRI1 Vitis vinifera VIT_13s0047g00340 N 0.763
GSMUA_Achr8G09350_001 Musa acuminata GSMUA_Achr8G09350_001 I 0.762
Cagra.2238s0017 Capsella grandiflora Cagra.2238s0017 N 0.761
Traes_5AL_F8DEBE8E7 Triticum aestivum Traes_5AL_F8DEBE8E7 I 0.758
Traes_5DL_2CF55DD05 Triticum aestivum Traes_5DL_2CF55DD05 I 0.758
mgf008907m Mimulus guttatus mgf008907m I 0.757
Gorai.013G003400 Gossypium raimondii Gorai.013G003400 I 0.757
OB11G11380 Oryza brachyantha OB11G11380 I 0.756
OB12G11690 Oryza brachyantha OB12G11690 I 0.756
ORGLA11G0014900 Oryza glaberrima ORGLA11G0014900 I 0.756
OS12G0126300 Oryza sativa OS12G0126300 I 0.756
Eucgr.J00316 Eucalyptus grandis Eucgr.J00316 I 0.756
BRADI4G43877 Brachypodium distachyon BRADI4G43877 I 0.754
Traes_1BL_3EFA4A82D Triticum aestivum Traes_1BL_3EFA4A82D N 0.754
SapurV1A.0036s0830 Salix purpurea SapurV1A.0036s0830 N 0.752
Solyc01g096860.1 Solanum lycopersicum Solyc01g096860.1 I 0.751
SapurV1A.0070s0630 Salix purpurea SapurV1A.0070s0630 N 0.746
POPTR_0006s19360 Populus trichocarpa POPTR_0006s19360 N 0.739
e_gw1.261.8.1 Physcomitrella patens e_gw1.261.8.1 N 0.732
GSMUA_Achr3G32510_001 Musa acuminata GSMUA_Achr3G32510_001 N 0.728
MDP0000166059 Malus domestica MDP0000166059 N 0.724
SELMODRAFT_108361 Selaginella moellendorffii SELMODRAFT_108361 N 0.717
LjSGA_030627.1 Lotus japonicus LjSGA_030627.1 N 0.700
OGLUM11G01480 Oryza glumaepatula OGLUM11G01480 N 0.699
Pavir.Fa00925 Panicum virgatum Pavir.Fa00925 N 0.698
Pavir.J08481 Panicum virgatum Pavir.J08481 N 0.697
Pavir.J34903 Panicum virgatum Pavir.J34903 N 0.697
OB01G43640 Oryza brachyantha OB01G43640 N 0.695
TRIUR3_04644 Triticum urartu TRIUR3_04644 N 0.693
Gorai.006G025200 Gossypium raimondii Gorai.006G025200 N 0.693
OB08G23780 Oryza brachyantha OB08G23780 N 0.692
GRMZM2G451031 Zea mays GRMZM2G451031 N 0.682
Sb03g037750 Sorghum bicolor Sb03g037750 N 0.682
PDK_20s1726381g002 Phoenix dactylifera PDK_20s1726381g002 N 0.681
BGIOSGA004677 Oryza indica BGIOSGA004677 N 0.678
OBART01G34800 Oryza barthii OBART01G34800 N 0.678
OGLUM01G38820 Oryza glumaepatula OGLUM01G38820 N 0.678
ONIVA01G39780 Oryza nivara ONIVA01G39780 N 0.678
ORGLA01G0286200 Oryza glaberrima ORGLA01G0286200 N 0.678
ORUFI01G38130 Oryza rufipogon ORUFI01G38130 N 0.678