Cagra.2238s0017 (Capsella grandiflora)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cagra.2238s0017 T007758_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.2238s0017.1.p AP2 56 113
Cagra.2238s0017.1.p AP2 140 190

Links

Other AP2 family TFs
Other Capsella grandiflora TFs

276 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10010918m.g Capsella rubella Carubv10010918m.g N 0.867
Carubv10020688m.g Capsella rubella Carubv10020688m.g N 0.865
Bo6g124080 Brassica oleracea Bo6g124080 N 0.848
Bostr.7128s0222 Boechera stricta Bostr.7128s0222 N 0.843
ADAP Arabidopsis lyrata fgenesh2_kg.1__1760__AT1G16060.1 N 0.843
Bo5g021520 Brassica oleracea Bo5g021520 N 0.838
AT1G79700 Arabidopsis thaliana AT1G79700 I 0.837
ADAP Arabidopsis thaliana AT1G16060 I 0.828
Thhalv10008118m.g Eutrema salsugineum Thhalv10008118m.g I 0.827
Lus10041618.g Linum usitatissimum Lus10041618.g I 0.827
Lus10024101.g Linum usitatissimum Lus10024101.g I 0.826
MDP0000231748 Malus domestica MDP0000231748 N 0.826
OBART09G10730 Oryza barthii OBART09G10730 N 0.826
OGLUM09G11130 Oryza glumaepatula OGLUM09G11130 I 0.826
OMERI09G08520 Oryza meridionalis OMERI09G08520 N 0.826
ORUFI09G11510 Oryza rufipogon ORUFI09G11510 N 0.826
LPERR09G07570 Leersia perrieri LPERR09G07570 N 0.826
Cla019044 Citrullus lanatus Cla019044 N 0.825
PRUPE_ppa007768mg Prunus persica PRUPE_ppa007768mg N 0.825
fgenesh2_kg.2__2276__AT1G79700.2 Arabidopsis lyrata fgenesh2_kg.2__2276__AT1G79700.2 I 0.825
Pm013856 Prunus mume Pm013856 N 0.825
Bostr.20129s0410 Boechera stricta Bostr.20129s0410 I 0.825
gene15913-v1.0-hybrid Fragaria vesca gene15913-v1.0-hybrid N 0.824
MDP0000133423 Malus domestica MDP0000133423 N 0.822
GLYMA06G30840 Glycine max GLYMA06G30840 N 0.822
TCM_038442 Theobroma cacao TCM_038442 N 0.822
PK26651.1 Cannabis sativa PK26651.1 I 0.822
MDP0000318457 Malus domestica MDP0000318457 N 0.822
gene27659-v1.0-hybrid Fragaria vesca gene27659-v1.0-hybrid N 0.822
Traes_5BL_B6C71B544 Triticum aestivum Traes_5BL_B6C71B544 I 0.822
Cagra.1725s0044 Capsella grandiflora Cagra.1725s0044 I 0.822
Bra026082 Brassica rapa Bra026082 I 0.822
Cucsa.106090 Cucumis sativus Cucsa.106090 N 0.822
Lus10001553.g Linum usitatissimum Lus10001553.g N 0.821
POPTR_0018s11110 Populus trichocarpa POPTR_0018s11110 N 0.821
chr6.CM0041.30.nd Lotus japonicus chr6.CM0041.30.nd N 0.821
Pavir.Bb02213 Panicum virgatum Pavir.Bb02213 I 0.821
BRADI4G30617 Brachypodium distachyon BRADI4G30617 I 0.821
MTR_2g460730 Medicago truncatula MTR_2g460730 N 0.821
Ciclev10010237m.g Citrus clementina Ciclev10010237m.g N 0.821
Bra035137 Brassica rapa Bra035137 I 0.821
GSMUA_Achr5G04670_001 Musa acuminata GSMUA_Achr5G04670_001 N 0.820
GLYMA04G24010 Glycine max GLYMA04G24010 N 0.820
GLYMA07G02380 Glycine max GLYMA07G02380 I 0.819
GLYMA08G23630 Glycine max GLYMA08G23630 I 0.819
Cla015555 Citrullus lanatus Cla015555 N 0.818
OB09G17420 Oryza brachyantha OB09G17420 I 0.817
BGIOSGA030783 Oryza indica BGIOSGA030783 I 0.817
Sb02g025080 Sorghum bicolor Sb02g025080 I 0.817
ONIVA09G10420 Oryza nivara ONIVA09G10420 I 0.817
OS09G0423800 Oryza sativa OS09G0423800 I 0.817
ORGLA09G0079700 Oryza glaberrima ORGLA09G0079700 I 0.817
Solyc03g117720.2 Solanum lycopersicum Solyc03g117720.2 I 0.816
MTR_4g007770 Medicago truncatula MTR_4g007770 N 0.815
Si030129m.g Setaria italica Si030129m.g I 0.815
GRMZM2G141219 Zea mays GRMZM2G141219 I 0.814
AMTR_s00019p00086450 Amborella trichopoda AMTR_s00019p00086450 I 0.814
Ca_17532 Cicer arietinum Ca_17532 N 0.814
Cucsa.170790 Cucumis sativus Cucsa.170790 I 0.813
AMTR_s00101p00022740 Amborella trichopoda AMTR_s00101p00022740 N 0.812
TCM_027569 Theobroma cacao TCM_027569 I 0.811
PRUPE_ppa023152mg Prunus persica PRUPE_ppa023152mg I 0.810
SapurV1A.0153s0330 Salix purpurea SapurV1A.0153s0330 I 0.810
OMERI06G03270 Oryza meridionalis OMERI06G03270 N 0.810
Gorai.012G098200 Gossypium raimondii Gorai.012G098200 I 0.810
VIT_09s0018g01650 Vitis vinifera VIT_09s0018g01650 I 0.810
Pm008629 Prunus mume Pm008629 I 0.810
POPTR_0001s03300 Populus trichocarpa POPTR_0001s03300 I 0.809
Aquca_048_00034 Aquilegia coerulea Aquca_048_00034 I 0.809
evm.TU.supercontig_199.10 Carica papaya evm.TU.supercontig_199.10 I 0.809
SapurV1A.1603s0090 Salix purpurea SapurV1A.1603s0090 I 0.809
SapurV1A.1535s0040 Salix purpurea SapurV1A.1535s0040 I 0.809
Eucgr.F03987 Eucalyptus grandis Eucgr.F03987 I 0.807
Aquca_016_00348 Aquilegia coerulea Aquca_016_00348 I 0.805
ORGLA08G0142100 Oryza glaberrima ORGLA08G0142100 I 0.804
VIT_11s0037g00870 Vitis vinifera VIT_11s0037g00870 N 0.804
SELMODRAFT_85823 Selaginella moellendorffii SELMODRAFT_85823 N 0.804
OS08G0442400 Oryza sativa OS08G0442400 I 0.804
BGIOSGA028751 Oryza indica BGIOSGA028751 I 0.804
GLYMA17G07860 Glycine max GLYMA17G07860 I 0.803
GLYMA02G36880 Glycine max GLYMA02G36880 I 0.803
Eucgr.C00238 Eucalyptus grandis Eucgr.C00238 N 0.803
Ciclev10025985m.g Citrus clementina Ciclev10025985m.g I 0.803
orange1.1g018990m.g Citrus sinensis orange1.1g018990m.g I 0.803
Solyc06g068570.2 Solanum lycopersicum Solyc06g068570.2 I 0.802
Thhalv10018877m.g Eutrema salsugineum Thhalv10018877m.g N 0.801
30114.m000507 Ricinus communis 30114.m000507 N 0.801
Gorai.009G122000 Gossypium raimondii Gorai.009G122000 I 0.799
ORUFI08G18170 Oryza rufipogon ORUFI08G18170 N 0.798
OGLUM08G17060 Oryza glumaepatula OGLUM08G17060 N 0.798
OMERI08G13500 Oryza meridionalis OMERI08G13500 N 0.798
LPERR08G13500 Leersia perrieri LPERR08G13500 N 0.798
ONIVA08G17820 Oryza nivara ONIVA08G17820 N 0.798
Pm015843 Prunus mume Pm015843 N 0.796
Solyc12g010490.1 Solanum lycopersicum Solyc12g010490.1 N 0.796
Gorai.009G008800 Gossypium raimondii Gorai.009G008800 I 0.793
PK04008.1 Cannabis sativa PK04008.1 I 0.793
Ca_03306 Cicer arietinum Ca_03306 N 0.793
OPUNC09G09320 Oryza punctata OPUNC09G09320 N 0.792
cassava16315.m1 Manihot esculenta cassava16315.m1 N 0.792
evm.TU.supercontig_54.28 Carica papaya evm.TU.supercontig_54.28 N 0.791
OPUNC08G14310 Oryza punctata OPUNC08G14310 N 0.791
OLONG_002862 Oryza longistaminata OLONG_002862 N 0.790
GRMZM2G124524 Zea mays GRMZM2G124524 I 0.789
Pavir.J19507 Panicum virgatum Pavir.J19507 N 0.788
Pm017032 Prunus mume Pm017032 N 0.788
WRI1 Arabidopsis lyrata fgenesh2_kg.5__1822__AT3G54320.1 N 0.788
BGIOSGA021927 Oryza indica BGIOSGA021927 N 0.788
OBART06G03040 Oryza barthii OBART06G03040 N 0.788
30069.m000440 Ricinus communis 30069.m000440 N 0.788
GRMZM2G073982 Zea mays GRMZM2G073982 N 0.788
Si012026m.g Setaria italica Si012026m.g N 0.788
Bo8g083590 Brassica oleracea Bo8g083590 I 0.788
ONIVA06G03970 Oryza nivara ONIVA06G03970 N 0.788
Si026433m.g Setaria italica Si026433m.g N 0.788
ORGLA06G0029800 Oryza glaberrima ORGLA06G0029800 N 0.788
Bra007066 Brassica rapa Bra007066 N 0.788
Sb10g003160 Sorghum bicolor Sb10g003160 N 0.788
Thhalv10010394m.g Eutrema salsugineum Thhalv10010394m.g N 0.788
ORUFI06G03000 Oryza rufipogon ORUFI06G03000 N 0.788
Gorai.011G225700 Gossypium raimondii Gorai.011G225700 I 0.788
TCM_044588 Theobroma cacao TCM_044588 I 0.787
SELMODRAFT_129793 Selaginella moellendorffii SELMODRAFT_129793 N 0.787
mgf019116m Mimulus guttatus mgf019116m N 0.787
Carubv10018845m.g Capsella rubella Carubv10018845m.g I 0.787
Ciclev10013824m.g Citrus clementina Ciclev10013824m.g N 0.787
Eucgr.J02131 Eucalyptus grandis Eucgr.J02131 N 0.787
WRI1 Arabidopsis thaliana AT3G54320 I 0.787
Cagra.0562s0024 Capsella grandiflora Cagra.0562s0024 I 0.787
orange1.1g042319m.g Citrus sinensis orange1.1g042319m.g N 0.787
Bostr.0697s0045 Boechera stricta Bostr.0697s0045 I 0.787
Bra003178 Brassica rapa Bra003178 N 0.786
Bo6g067950 Brassica oleracea Bo6g067950 I 0.786
Ca_20689 Cicer arietinum Ca_20689 N 0.786
GSMUA_Achr3G03630_001 Musa acuminata GSMUA_Achr3G03630_001 I 0.786
Ciclev10003896m.g Citrus clementina Ciclev10003896m.g N 0.785
evm.TU.supercontig_14.38 Carica papaya evm.TU.supercontig_14.38 N 0.785
BRADI2G48130 Brachypodium distachyon BRADI2G48130 N 0.785
orange1.1g036423m.g Citrus sinensis orange1.1g036423m.g N 0.785
Si007857m.g Setaria italica Si007857m.g N 0.784
MTR_8g044070 Medicago truncatula MTR_8g044070 N 0.784
Traes_7AS_A70A185F1 Triticum aestivum Traes_7AS_A70A185F1 N 0.784
TCM_018386 Theobroma cacao TCM_018386 N 0.782
Gorai.001G256900 Gossypium raimondii Gorai.001G256900 N 0.782
Sb05g001790 Sorghum bicolor Sb05g001790 I 0.781
Lus10030671.g Linum usitatissimum Lus10030671.g N 0.780
Lus10005253.g Linum usitatissimum Lus10005253.g N 0.780
MTR_4g130270 Medicago truncatula MTR_4g130270 I 0.780
GLYMA18G16236 Glycine max GLYMA18G16236 N 0.779
GLYMA08G40831 Glycine max GLYMA08G40831 N 0.778
mgf019814m Mimulus guttatus mgf019814m N 0.777
Lus10037209.g Linum usitatissimum Lus10037209.g I 0.777
mgf017413m Mimulus guttatus mgf017413m N 0.777
Cla020765 Citrullus lanatus Cla020765 N 0.777
Lus10036719.g Linum usitatissimum Lus10036719.g I 0.777
Cucsa.282940 Cucumis sativus Cucsa.282940 N 0.776
Traes_4AL_C863DCEDC Triticum aestivum Traes_4AL_C863DCEDC N 0.776
cassava39084.m1 Manihot esculenta cassava39084.m1 I 0.776
evm.TU.contig_28586.3 Carica papaya evm.TU.contig_28586.3 N 0.775
OS06G0145700 Oryza sativa OS06G0145700 N 0.775
MDP0000281784 Malus domestica MDP0000281784 I 0.775
Lus10030792.g Linum usitatissimum Lus10030792.g N 0.774
MTR_8g044040 Medicago truncatula MTR_8g044040 N 0.774
mg013664m Mimulus guttatus mg013664m N 0.773
GLYMA08G24420 Glycine max GLYMA08G24420 N 0.773
PK24809.1 Cannabis sativa PK24809.1 I 0.772
GLYMA18G49101 Glycine max GLYMA18G49101 N 0.771
GLYMA15G34770 Glycine max GLYMA15G34770 N 0.770
cassava11368.m1 Manihot esculenta cassava11368.m1 N 0.770
VIT_01s0026g01690 Vitis vinifera VIT_01s0026g01690 N 0.770
Aquca_074_00065 Aquilegia coerulea Aquca_074_00065 I 0.770
GLYMA09G37540 Glycine max GLYMA09G37540 N 0.770
29822.m003477 Ricinus communis 29822.m003477 N 0.770
gene01262-v1.0-hybrid Fragaria vesca gene01262-v1.0-hybrid I 0.770
VIT_14s0108g00050 Vitis vinifera VIT_14s0108g00050 N 0.770
POPTR_0017s11470 Populus trichocarpa POPTR_0017s11470 N 0.770
PRUPE_ppa024318mg Prunus persica PRUPE_ppa024318mg N 0.770
MDP0000297698 Malus domestica MDP0000297698 N 0.769
Eucgr.I01921 Eucalyptus grandis Eucgr.I01921 N 0.769
MDP0000186581 Malus domestica MDP0000186581 N 0.769
Lus10013268.g Linum usitatissimum Lus10013268.g N 0.769
Solyc06g066390.1 Solanum lycopersicum Solyc06g066390.1 N 0.767
gene00377-v1.0-hybrid Fragaria vesca gene00377-v1.0-hybrid N 0.767
Gorai.006G025100 Gossypium raimondii Gorai.006G025100 N 0.766
POPTR_0006s19360 Populus trichocarpa POPTR_0006s19360 N 0.766
Ca_10533 Cicer arietinum Ca_10533 N 0.765
MTR_8g468920 Medicago truncatula MTR_8g468920 N 0.764
MTR_6g011490 Medicago truncatula MTR_6g011490 N 0.763
e_gw1.32.189.1 Physcomitrella patens e_gw1.32.189.1 N 0.763
chr2.CM0608.630.nc Lotus japonicus chr2.CM0608.630.nc N 0.761
Pavir.J34675 Panicum virgatum Pavir.J34675 I 0.760
OMERI01G26790 Oryza meridionalis OMERI01G26790 I 0.760
Gorai.012G056300 Gossypium raimondii Gorai.012G056300 N 0.760
GRMZM2G113078 Zea mays GRMZM2G113078 I 0.760
Pavir.J02216 Panicum virgatum Pavir.J02216 I 0.760
BRADI2G18570 Brachypodium distachyon BRADI2G18570 I 0.760
LPERR05G19870 Leersia perrieri LPERR05G19870 I 0.760
POPTR_0003s18350 Populus trichocarpa POPTR_0003s18350 N 0.760
F775_02400 Aegilops tauschii F775_02400 I 0.760
TRIUR3_01982 Triticum urartu TRIUR3_01982 I 0.760
Si022186m.g Setaria italica Si022186m.g I 0.760
Sb09g026800 Sorghum bicolor Sb09g026800 I 0.760
MDP0000206674 Malus domestica MDP0000206674 N 0.759
Eucgr.J00316 Eucalyptus grandis Eucgr.J00316 I 0.759
TRIUR3_24036 Triticum urartu TRIUR3_24036 N 0.758
Lus10008939.g Linum usitatissimum Lus10008939.g N 0.757
POPTR_0010s10290 Populus trichocarpa POPTR_0010s10290 N 0.756
PRUPE_ppa022978mg Prunus persica PRUPE_ppa022978mg N 0.756
MTR_7g009410 Medicago truncatula MTR_7g009410 N 0.756
Pm015847 Prunus mume Pm015847 N 0.756
PGSC0003DMG400002399 Solanum tuberosum PGSC0003DMG400002399 N 0.755
AMTR_s00202p00017170 Amborella trichopoda AMTR_s00202p00017170 N 0.755
Pm006561 Prunus mume Pm006561 N 0.754
MDP0000166059 Malus domestica MDP0000166059 N 0.754
PRUPE_ppa022243mg Prunus persica PRUPE_ppa022243mg N 0.754
Lus10028880.g Linum usitatissimum Lus10028880.g N 0.753
chr2.CM0225.20.nc Lotus japonicus chr2.CM0225.20.nc N 0.753
Gorai.008G182500 Gossypium raimondii Gorai.008G182500 N 0.752
mgf008907m Mimulus guttatus mgf008907m I 0.752
Solyc01g096860.1 Solanum lycopersicum Solyc01g096860.1 I 0.751
SELMODRAFT_78076 Selaginella moellendorffii SELMODRAFT_78076 N 0.751
BGIOSGA036704 Oryza indica BGIOSGA036704 N 0.751
Gorai.013G003400 Gossypium raimondii Gorai.013G003400 I 0.751
BGIOSGA034580 Oryza indica BGIOSGA034580 N 0.751
OPUNC12G01560 Oryza punctata OPUNC12G01560 N 0.751
OPUNC11G01540 Oryza punctata OPUNC11G01540 N 0.751
ONIVA11G01800 Oryza nivara ONIVA11G01800 N 0.751
ORGLA12G0015400 Oryza glaberrima ORGLA12G0015400 N 0.751
TCM_011797 Theobroma cacao TCM_011797 N 0.751
ONIVA03G39530 Oryza nivara ONIVA03G39530 N 0.751
OMERI12G00060 Oryza meridionalis OMERI12G00060 N 0.751
OMERI11G02080 Oryza meridionalis OMERI11G02080 N 0.751
PGSC0003DMG400027502 Solanum tuberosum PGSC0003DMG400027502 N 0.748
GSMUA_Achr8G09350_001 Musa acuminata GSMUA_Achr8G09350_001 I 0.747
WRI1 Vitis vinifera VIT_13s0047g00340 N 0.747
SapurV1A.0036s0830 Salix purpurea SapurV1A.0036s0830 N 0.747
PDK_20s13009417g005 Phoenix dactylifera PDK_20s13009417g005 N 0.746
Traes_5DL_2CF55DD05 Triticum aestivum Traes_5DL_2CF55DD05 I 0.745
Traes_5AL_F8DEBE8E7 Triticum aestivum Traes_5AL_F8DEBE8E7 I 0.745
GRMZM2G174834 Zea mays GRMZM2G174834 I 0.744
Eucgr.B03412 Eucalyptus grandis Eucgr.B03412 I 0.744
ORGLA11G0014900 Oryza glaberrima ORGLA11G0014900 I 0.743
LPERR12G01610 Leersia perrieri LPERR12G01610 N 0.743
GRMZM2G131266 Zea mays GRMZM2G131266 N 0.743
OS12G0126300 Oryza sativa OS12G0126300 I 0.743
OB12G11690 Oryza brachyantha OB12G11690 I 0.743
OB11G11380 Oryza brachyantha OB11G11380 I 0.743
BGIOSGA017664 Oryza indica BGIOSGA017664 I 0.742
OS05G0536250 Oryza sativa OS05G0536250 I 0.742
OLONG_014256 Oryza longistaminata OLONG_014256 I 0.742
OPUNC05G21440 Oryza punctata OPUNC05G21440 I 0.742
BRADI4G43877 Brachypodium distachyon BRADI4G43877 I 0.741
OB05G31600 Oryza brachyantha OB05G31600 I 0.741
Ciclev10033673m.g Citrus clementina Ciclev10033673m.g N 0.739
Aquca_002_00506 Aquilegia coerulea Aquca_002_00506 I 0.738
F775_02064 Aegilops tauschii F775_02064 N 0.737
POPTR_0010s25340 Populus trichocarpa POPTR_0010s25340 N 0.737
Si013842m.g Setaria italica Si013842m.g N 0.736
BRADI3G36820 Brachypodium distachyon BRADI3G36820 N 0.735
Sb07g021800 Sorghum bicolor Sb07g021800 N 0.731
F775_06373 Aegilops tauschii F775_06373 N 0.730
orange1.1g043551m.g Citrus sinensis orange1.1g043551m.g N 0.728
GRMZM2G451031 Zea mays GRMZM2G451031 N 0.727
Traes_1BL_3EFA4A82D Triticum aestivum Traes_1BL_3EFA4A82D N 0.725
OBART12G01740 Oryza barthii OBART12G01740 N 0.724
Cla017294 Citrullus lanatus Cla017294 N 0.720
SapurV1A.0070s0630 Salix purpurea SapurV1A.0070s0630 N 0.719
SELMODRAFT_108361 Selaginella moellendorffii SELMODRAFT_108361 N 0.692
LPERR01G30020 Leersia perrieri LPERR01G30020 N 0.691
e_gw1.261.8.1 Physcomitrella patens e_gw1.261.8.1 N 0.687
TRIUR3_04644 Triticum urartu TRIUR3_04644 N 0.685
LjSGA_030627.1 Lotus japonicus LjSGA_030627.1 N 0.682
Bo5g105180 Brassica oleracea Bo5g105180 I 0.681
OB01G43640 Oryza brachyantha OB01G43640 N 0.681
Sb03g037750 Sorghum bicolor Sb03g037750 N 0.680
Aquca_009_00255 Aquilegia coerulea Aquca_009_00255 I 0.679