Solyc12g010490.1 (Solanum lycopersicum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Solyc12g010490.1 T005549_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc12g010490.1.1 AP2 46 103
Solyc12g010490.1.1 AP2 145 197

Links

Other AP2 family TFs
Other Solanum lycopersicum TFs

280 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.C00238 Eucalyptus grandis Eucgr.C00238 N 0.889
Ca_03306 Cicer arietinum Ca_03306 N 0.888
MTR_4g130270 Medicago truncatula MTR_4g130270 I 0.882
MDP0000133423 Malus domestica MDP0000133423 N 0.874
gene27659-v1.0-hybrid Fragaria vesca gene27659-v1.0-hybrid N 0.874
TCM_038442 Theobroma cacao TCM_038442 N 0.874
GLYMA06G30840 Glycine max GLYMA06G30840 N 0.874
MDP0000318457 Malus domestica MDP0000318457 N 0.874
Ciclev10010237m.g Citrus clementina Ciclev10010237m.g N 0.873
chr6.CM0041.30.nd Lotus japonicus chr6.CM0041.30.nd N 0.873
MTR_2g460730 Medicago truncatula MTR_2g460730 N 0.873
Gorai.009G008800 Gossypium raimondii Gorai.009G008800 I 0.873
Lus10001553.g Linum usitatissimum Lus10001553.g N 0.873
POPTR_0018s11110 Populus trichocarpa POPTR_0018s11110 N 0.873
GLYMA04G24010 Glycine max GLYMA04G24010 N 0.872
Cla019044 Citrullus lanatus Cla019044 N 0.869
PRUPE_ppa007768mg Prunus persica PRUPE_ppa007768mg N 0.869
Pm013856 Prunus mume Pm013856 N 0.869
VIT_09s0018g01650 Vitis vinifera VIT_09s0018g01650 I 0.867
PRUPE_ppa023152mg Prunus persica PRUPE_ppa023152mg I 0.867
Pm008629 Prunus mume Pm008629 I 0.867
Gorai.012G098200 Gossypium raimondii Gorai.012G098200 I 0.867
MDP0000231748 Malus domestica MDP0000231748 N 0.867
SapurV1A.0153s0330 Salix purpurea SapurV1A.0153s0330 I 0.867
evm.TU.supercontig_199.10 Carica papaya evm.TU.supercontig_199.10 I 0.867
gene15913-v1.0-hybrid Fragaria vesca gene15913-v1.0-hybrid N 0.867
Cucsa.106090 Cucumis sativus Cucsa.106090 N 0.867
POPTR_0001s03300 Populus trichocarpa POPTR_0001s03300 I 0.866
Aquca_048_00034 Aquilegia coerulea Aquca_048_00034 I 0.866
SapurV1A.1535s0040 Salix purpurea SapurV1A.1535s0040 I 0.866
SapurV1A.1603s0090 Salix purpurea SapurV1A.1603s0090 I 0.866
TCM_027569 Theobroma cacao TCM_027569 I 0.865
Cla015555 Citrullus lanatus Cla015555 N 0.863
Eucgr.F03987 Eucalyptus grandis Eucgr.F03987 I 0.863
Cucsa.170790 Cucumis sativus Cucsa.170790 I 0.863
OBART09G10730 Oryza barthii OBART09G10730 N 0.862
LPERR09G07570 Leersia perrieri LPERR09G07570 N 0.862
OGLUM09G11130 Oryza glumaepatula OGLUM09G11130 I 0.862
OMERI09G08520 Oryza meridionalis OMERI09G08520 N 0.862
ORUFI09G11510 Oryza rufipogon ORUFI09G11510 N 0.862
GSMUA_Achr5G04670_001 Musa acuminata GSMUA_Achr5G04670_001 N 0.860
AMTR_s00019p00086450 Amborella trichopoda AMTR_s00019p00086450 I 0.860
Solyc03g117720.2 Solanum lycopersicum Solyc03g117720.2 I 0.860
Si030129m.g Setaria italica Si030129m.g I 0.860
OS09G0423800 Oryza sativa OS09G0423800 I 0.859
Sb02g025080 Sorghum bicolor Sb02g025080 I 0.859
OB09G17420 Oryza brachyantha OB09G17420 I 0.859
ONIVA09G10420 Oryza nivara ONIVA09G10420 I 0.859
BGIOSGA030783 Oryza indica BGIOSGA030783 I 0.859
ORGLA09G0079700 Oryza glaberrima ORGLA09G0079700 I 0.859
PK26651.1 Cannabis sativa PK26651.1 I 0.858
BRADI4G30617 Brachypodium distachyon BRADI4G30617 I 0.853
Pavir.Bb02213 Panicum virgatum Pavir.Bb02213 I 0.853
GRMZM2G141219 Zea mays GRMZM2G141219 I 0.853
GLYMA02G36880 Glycine max GLYMA02G36880 I 0.851
Ca_17532 Cicer arietinum Ca_17532 N 0.851
GLYMA17G07860 Glycine max GLYMA17G07860 I 0.851
GLYMA07G02380 Glycine max GLYMA07G02380 I 0.851
GLYMA08G23630 Glycine max GLYMA08G23630 I 0.851
Traes_5BL_B6C71B544 Triticum aestivum Traes_5BL_B6C71B544 I 0.851
Aquca_016_00348 Aquilegia coerulea Aquca_016_00348 I 0.850
AMTR_s00101p00022740 Amborella trichopoda AMTR_s00101p00022740 N 0.850
MTR_4g007770 Medicago truncatula MTR_4g007770 N 0.849
Lus10024101.g Linum usitatissimum Lus10024101.g I 0.849
Lus10041618.g Linum usitatissimum Lus10041618.g I 0.848
VIT_11s0037g00870 Vitis vinifera VIT_11s0037g00870 N 0.846
orange1.1g018990m.g Citrus sinensis orange1.1g018990m.g I 0.842
Ciclev10025985m.g Citrus clementina Ciclev10025985m.g I 0.842
SELMODRAFT_85823 Selaginella moellendorffii SELMODRAFT_85823 N 0.842
Bo6g124080 Brassica oleracea Bo6g124080 N 0.836
30114.m000507 Ricinus communis 30114.m000507 N 0.836
Bostr.7128s0222 Boechera stricta Bostr.7128s0222 N 0.834
Gorai.009G122000 Gossypium raimondii Gorai.009G122000 I 0.834
ADAP Arabidopsis lyrata fgenesh2_kg.1__1760__AT1G16060.1 N 0.834
Bo5g021520 Brassica oleracea Bo5g021520 N 0.831
30069.m000440 Ricinus communis 30069.m000440 N 0.829
Bra035137 Brassica rapa Bra035137 I 0.829
OPUNC09G09320 Oryza punctata OPUNC09G09320 N 0.829
Bostr.20129s0410 Boechera stricta Bostr.20129s0410 I 0.829
fgenesh2_kg.2__2276__AT1G79700.2 Arabidopsis lyrata fgenesh2_kg.2__2276__AT1G79700.2 I 0.827
Bo8g083590 Brassica oleracea Bo8g083590 I 0.827
WRI1 Arabidopsis lyrata fgenesh2_kg.5__1822__AT3G54320.1 N 0.827
Carubv10020688m.g Capsella rubella Carubv10020688m.g N 0.827
Thhalv10008118m.g Eutrema salsugineum Thhalv10008118m.g I 0.827
Bra007066 Brassica rapa Bra007066 N 0.827
Pm017032 Prunus mume Pm017032 N 0.827
ADAP Arabidopsis thaliana AT1G16060 I 0.827
Thhalv10010394m.g Eutrema salsugineum Thhalv10010394m.g N 0.827
Cagra.0562s0024 Capsella grandiflora Cagra.0562s0024 I 0.826
Carubv10018845m.g Capsella rubella Carubv10018845m.g I 0.826
Bra003178 Brassica rapa Bra003178 N 0.826
WRI1 Arabidopsis thaliana AT3G54320 I 0.826
Bostr.0697s0045 Boechera stricta Bostr.0697s0045 I 0.826
OLONG_002862 Oryza longistaminata OLONG_002862 N 0.826
Carubv10010918m.g Capsella rubella Carubv10010918m.g N 0.825
GLYMA08G24420 Glycine max GLYMA08G24420 N 0.825
cassava16315.m1 Manihot esculenta cassava16315.m1 N 0.825
POPTR_0006s19360 Populus trichocarpa POPTR_0006s19360 N 0.825
Bo6g067950 Brassica oleracea Bo6g067950 I 0.825
Bra026082 Brassica rapa Bra026082 I 0.824
GLYMA15G34770 Glycine max GLYMA15G34770 N 0.822
PK04008.1 Cannabis sativa PK04008.1 I 0.821
Solyc06g068570.2 Solanum lycopersicum Solyc06g068570.2 I 0.821
mgf017413m Mimulus guttatus mgf017413m N 0.821
evm.TU.supercontig_54.28 Carica papaya evm.TU.supercontig_54.28 N 0.819
MTR_6g011490 Medicago truncatula MTR_6g011490 N 0.818
AT1G79700 Arabidopsis thaliana AT1G79700 I 0.818
ORGLA08G0142100 Oryza glaberrima ORGLA08G0142100 I 0.817
GSMUA_Achr3G03630_001 Musa acuminata GSMUA_Achr3G03630_001 I 0.817
OS08G0442400 Oryza sativa OS08G0442400 I 0.817
mgf019116m Mimulus guttatus mgf019116m N 0.817
BGIOSGA028751 Oryza indica BGIOSGA028751 I 0.817
gene00377-v1.0-hybrid Fragaria vesca gene00377-v1.0-hybrid N 0.817
Gorai.011G225700 Gossypium raimondii Gorai.011G225700 I 0.816
TCM_044588 Theobroma cacao TCM_044588 I 0.815
SELMODRAFT_129793 Selaginella moellendorffii SELMODRAFT_129793 N 0.815
Gorai.001G256900 Gossypium raimondii Gorai.001G256900 N 0.815
POPTR_0003s18350 Populus trichocarpa POPTR_0003s18350 N 0.815
OPUNC08G14310 Oryza punctata OPUNC08G14310 N 0.815
orange1.1g036423m.g Citrus sinensis orange1.1g036423m.g N 0.814
Ciclev10003896m.g Citrus clementina Ciclev10003896m.g N 0.814
29822.m003477 Ricinus communis 29822.m003477 N 0.813
ONIVA08G17820 Oryza nivara ONIVA08G17820 N 0.813
ORUFI08G18170 Oryza rufipogon ORUFI08G18170 N 0.813
VIT_14s0108g00050 Vitis vinifera VIT_14s0108g00050 N 0.813
OGLUM08G17060 Oryza glumaepatula OGLUM08G17060 N 0.813
OMERI08G13500 Oryza meridionalis OMERI08G13500 N 0.813
LPERR08G13500 Leersia perrieri LPERR08G13500 N 0.813
POPTR_0017s11470 Populus trichocarpa POPTR_0017s11470 N 0.813
cassava11368.m1 Manihot esculenta cassava11368.m1 N 0.813
PRUPE_ppa024318mg Prunus persica PRUPE_ppa024318mg N 0.813
mgf008907m Mimulus guttatus mgf008907m I 0.812
VIT_01s0026g01690 Vitis vinifera VIT_01s0026g01690 N 0.811
GRMZM2G124524 Zea mays GRMZM2G124524 I 0.811
Sb05g001790 Sorghum bicolor Sb05g001790 I 0.811
Gorai.013G003400 Gossypium raimondii Gorai.013G003400 I 0.810
MTR_8g044070 Medicago truncatula MTR_8g044070 N 0.810
Cla020765 Citrullus lanatus Cla020765 N 0.809
Si026433m.g Setaria italica Si026433m.g N 0.809
Si012026m.g Setaria italica Si012026m.g N 0.809
Ca_10533 Cicer arietinum Ca_10533 N 0.808
MTR_8g044040 Medicago truncatula MTR_8g044040 N 0.807
Lus10013268.g Linum usitatissimum Lus10013268.g N 0.806
Cucsa.282940 Cucumis sativus Cucsa.282940 N 0.805
Ca_20689 Cicer arietinum Ca_20689 N 0.804
Cagra.1725s0044 Capsella grandiflora Cagra.1725s0044 I 0.804
mg013664m Mimulus guttatus mg013664m N 0.804
evm.TU.contig_28586.3 Carica papaya evm.TU.contig_28586.3 N 0.803
evm.TU.supercontig_14.38 Carica papaya evm.TU.supercontig_14.38 N 0.803
cassava39084.m1 Manihot esculenta cassava39084.m1 I 0.802
Lus10037209.g Linum usitatissimum Lus10037209.g I 0.801
Lus10036719.g Linum usitatissimum Lus10036719.g I 0.801
TCM_018386 Theobroma cacao TCM_018386 N 0.801
MDP0000281784 Malus domestica MDP0000281784 I 0.800
PK24809.1 Cannabis sativa PK24809.1 I 0.799
MDP0000186581 Malus domestica MDP0000186581 N 0.799
Lus10005253.g Linum usitatissimum Lus10005253.g N 0.799
MDP0000297698 Malus domestica MDP0000297698 N 0.799
gene01262-v1.0-hybrid Fragaria vesca gene01262-v1.0-hybrid I 0.799
Lus10030792.g Linum usitatissimum Lus10030792.g N 0.799
Gorai.006G025100 Gossypium raimondii Gorai.006G025100 N 0.799
Lus10030671.g Linum usitatissimum Lus10030671.g N 0.799
mgf019814m Mimulus guttatus mgf019814m N 0.797
Aquca_074_00065 Aquilegia coerulea Aquca_074_00065 I 0.797
GLYMA09G37540 Glycine max GLYMA09G37540 N 0.796
GLYMA18G49101 Glycine max GLYMA18G49101 N 0.796
Cagra.2238s0017 Capsella grandiflora Cagra.2238s0017 N 0.796
Solyc06g066390.1 Solanum lycopersicum Solyc06g066390.1 N 0.796
chr2.CM0225.20.nc Lotus japonicus chr2.CM0225.20.nc N 0.795
GLYMA18G16236 Glycine max GLYMA18G16236 N 0.795
Ciclev10013824m.g Citrus clementina Ciclev10013824m.g N 0.794
Eucgr.J02131 Eucalyptus grandis Eucgr.J02131 N 0.794
orange1.1g042319m.g Citrus sinensis orange1.1g042319m.g N 0.794
GLYMA08G40831 Glycine max GLYMA08G40831 N 0.794
MTR_7g009410 Medicago truncatula MTR_7g009410 N 0.792
BRADI2G48130 Brachypodium distachyon BRADI2G48130 N 0.791
POPTR_0010s10290 Populus trichocarpa POPTR_0010s10290 N 0.789
PRUPE_ppa022978mg Prunus persica PRUPE_ppa022978mg N 0.789
Pm015847 Prunus mume Pm015847 N 0.789
Thhalv10018877m.g Eutrema salsugineum Thhalv10018877m.g N 0.789
BGIOSGA021927 Oryza indica BGIOSGA021927 N 0.788
ONIVA06G03970 Oryza nivara ONIVA06G03970 N 0.788
GRMZM2G073982 Zea mays GRMZM2G073982 N 0.788
AMTR_s00202p00017170 Amborella trichopoda AMTR_s00202p00017170 N 0.788
OBART06G03040 Oryza barthii OBART06G03040 N 0.788
Pavir.J19507 Panicum virgatum Pavir.J19507 N 0.788
ORGLA06G0029800 Oryza glaberrima ORGLA06G0029800 N 0.788
ORUFI06G03000 Oryza rufipogon ORUFI06G03000 N 0.788
Sb10g003160 Sorghum bicolor Sb10g003160 N 0.788
Si007857m.g Setaria italica Si007857m.g N 0.787
MDP0000206674 Malus domestica MDP0000206674 N 0.787
Pm006561 Prunus mume Pm006561 N 0.787
PRUPE_ppa022243mg Prunus persica PRUPE_ppa022243mg N 0.787
Traes_7AS_A70A185F1 Triticum aestivum Traes_7AS_A70A185F1 N 0.787
MDP0000166059 Malus domestica MDP0000166059 N 0.784
e_gw1.32.189.1 Physcomitrella patens e_gw1.32.189.1 N 0.783
PGSC0003DMG400002399 Solanum tuberosum PGSC0003DMG400002399 N 0.783
TRIUR3_24036 Triticum urartu TRIUR3_24036 N 0.782
Gorai.012G056300 Gossypium raimondii Gorai.012G056300 N 0.781
Gorai.008G182500 Gossypium raimondii Gorai.008G182500 N 0.781
Lus10008939.g Linum usitatissimum Lus10008939.g N 0.781
POPTR_0010s25340 Populus trichocarpa POPTR_0010s25340 N 0.780
Traes_4AL_C863DCEDC Triticum aestivum Traes_4AL_C863DCEDC N 0.779
TCM_011797 Theobroma cacao TCM_011797 N 0.779
PGSC0003DMG400027502 Solanum tuberosum PGSC0003DMG400027502 N 0.779
SELMODRAFT_78076 Selaginella moellendorffii SELMODRAFT_78076 N 0.777
SapurV1A.0036s0830 Salix purpurea SapurV1A.0036s0830 N 0.777
Pm015843 Prunus mume Pm015843 N 0.776
MTR_8g468920 Medicago truncatula MTR_8g468920 N 0.776
Eucgr.J00316 Eucalyptus grandis Eucgr.J00316 I 0.775
Lus10028880.g Linum usitatissimum Lus10028880.g N 0.775
Eucgr.I01921 Eucalyptus grandis Eucgr.I01921 N 0.775
OS06G0145700 Oryza sativa OS06G0145700 N 0.775
GRMZM2G174834 Zea mays GRMZM2G174834 I 0.774
OPUNC11G01540 Oryza punctata OPUNC11G01540 N 0.773
OPUNC12G01560 Oryza punctata OPUNC12G01560 N 0.773
ORGLA12G0015400 Oryza glaberrima ORGLA12G0015400 N 0.773
ONIVA03G39530 Oryza nivara ONIVA03G39530 N 0.773
OMERI12G00060 Oryza meridionalis OMERI12G00060 N 0.773
OMERI11G02080 Oryza meridionalis OMERI11G02080 N 0.773
ONIVA11G01800 Oryza nivara ONIVA11G01800 N 0.773
chr2.CM0608.630.nc Lotus japonicus chr2.CM0608.630.nc N 0.773
BGIOSGA036704 Oryza indica BGIOSGA036704 N 0.773
BGIOSGA034580 Oryza indica BGIOSGA034580 N 0.773
Traes_5DL_2CF55DD05 Triticum aestivum Traes_5DL_2CF55DD05 I 0.772
Traes_5AL_F8DEBE8E7 Triticum aestivum Traes_5AL_F8DEBE8E7 I 0.772
Ciclev10033673m.g Citrus clementina Ciclev10033673m.g N 0.770
GRMZM2G131266 Zea mays GRMZM2G131266 N 0.770
OS12G0126300 Oryza sativa OS12G0126300 I 0.770
ORGLA11G0014900 Oryza glaberrima ORGLA11G0014900 I 0.770
Eucgr.B03412 Eucalyptus grandis Eucgr.B03412 I 0.770
OB12G11690 Oryza brachyantha OB12G11690 I 0.770
OB11G11380 Oryza brachyantha OB11G11380 I 0.770
BRADI4G43877 Brachypodium distachyon BRADI4G43877 I 0.768
GSMUA_Achr8G09350_001 Musa acuminata GSMUA_Achr8G09350_001 I 0.768
Solyc01g096860.1 Solanum lycopersicum Solyc01g096860.1 I 0.767
Aquca_002_00506 Aquilegia coerulea Aquca_002_00506 I 0.767
LPERR12G01610 Leersia perrieri LPERR12G01610 N 0.766
Sb09g026800 Sorghum bicolor Sb09g026800 I 0.763
LPERR05G19870 Leersia perrieri LPERR05G19870 I 0.763
Pavir.J02216 Panicum virgatum Pavir.J02216 I 0.763
Si022186m.g Setaria italica Si022186m.g I 0.763
OMERI01G26790 Oryza meridionalis OMERI01G26790 I 0.763
BRADI2G18570 Brachypodium distachyon BRADI2G18570 I 0.763
TRIUR3_01982 Triticum urartu TRIUR3_01982 I 0.763
F775_02400 Aegilops tauschii F775_02400 I 0.763
GRMZM2G113078 Zea mays GRMZM2G113078 I 0.763
Pavir.J34675 Panicum virgatum Pavir.J34675 I 0.763
PDK_20s13009417g005 Phoenix dactylifera PDK_20s13009417g005 N 0.757
Cla017294 Citrullus lanatus Cla017294 N 0.755
OMERI06G03270 Oryza meridionalis OMERI06G03270 N 0.755
SapurV1A.0070s0630 Salix purpurea SapurV1A.0070s0630 N 0.753
F775_06373 Aegilops tauschii F775_06373 N 0.752
OLONG_014256 Oryza longistaminata OLONG_014256 I 0.745
OPUNC05G21440 Oryza punctata OPUNC05G21440 I 0.745
BGIOSGA017664 Oryza indica BGIOSGA017664 I 0.745
OS05G0536250 Oryza sativa OS05G0536250 I 0.745
OB05G31600 Oryza brachyantha OB05G31600 I 0.744
OBART12G01740 Oryza barthii OBART12G01740 N 0.744
Si013842m.g Setaria italica Si013842m.g N 0.743
orange1.1g043551m.g Citrus sinensis orange1.1g043551m.g N 0.743
Sb07g021800 Sorghum bicolor Sb07g021800 N 0.741
WRI1 Vitis vinifera VIT_13s0047g00340 N 0.740
BRADI3G36820 Brachypodium distachyon BRADI3G36820 N 0.740
F775_02064 Aegilops tauschii F775_02064 N 0.739
Traes_1BL_3EFA4A82D Triticum aestivum Traes_1BL_3EFA4A82D N 0.728
SELMODRAFT_108361 Selaginella moellendorffii SELMODRAFT_108361 N 0.725
TRIUR3_04644 Triticum urartu TRIUR3_04644 N 0.707
LjSGA_030627.1 Lotus japonicus LjSGA_030627.1 N 0.706
e_gw1.261.8.1 Physcomitrella patens e_gw1.261.8.1 N 0.701
Pavir.J34903 Panicum virgatum Pavir.J34903 N 0.697
Pavir.J08481 Panicum virgatum Pavir.J08481 N 0.697
POPTR_0008s01260 Populus trichocarpa POPTR_0008s01260 N 0.694
GRMZM2G451031 Zea mays GRMZM2G451031 N 0.693
GSMUA_Achr3G32510_001 Musa acuminata GSMUA_Achr3G32510_001 N 0.692
OB08G23780 Oryza brachyantha OB08G23780 N 0.691
OB01G43640 Oryza brachyantha OB01G43640 N 0.690
Pavir.Ia03819 Panicum virgatum Pavir.Ia03819 I 0.687
OGLUM11G01480 Oryza glumaepatula OGLUM11G01480 N 0.682
GSMUA_Achr3G09410_001 Musa acuminata GSMUA_Achr3G09410_001 N 0.677