CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr3G09410_001
(
Musa acuminata
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GSMUA_Achr3G09410_001
T002348_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr3P09410_001
AP2
62
122
SNFKGVTRHKLTGRFEAHLWDRTSWNGRKNKKGRQVYLGAFKDEETAARTYDLAALKYWGP
GSMUA_Achr3P09410_001
AP2
164
216
SKYRGVARHHQNGRWEARIGHVGGSKYLYLGTFDTQEEAAQAYDMAAIKYRGS
Links
Other
AP2
family TFs
Other
Musa acuminata
TFs
118 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cucsa.282940
Cucumis sativus
Cucsa.282940
N
0.710
Eucgr.J00316
Eucalyptus grandis
Eucgr.J00316
I
0.709
MTR_4g130270
Medicago truncatula
MTR_4g130270
I
0.708
BRADI4G43877
Brachypodium distachyon
BRADI4G43877
I
0.703
Traes_5AL_F8DEBE8E7
Triticum aestivum
Traes_5AL_F8DEBE8E7
I
0.703
Traes_5DL_2CF55DD05
Triticum aestivum
Traes_5DL_2CF55DD05
I
0.703
GRMZM2G113078
Zea mays
GRMZM2G113078
I
0.702
LPERR05G19870
Leersia perrieri
LPERR05G19870
I
0.702
OMERI01G26790
Oryza meridionalis
OMERI01G26790
I
0.702
Sb09g026800
Sorghum bicolor
Sb09g026800
I
0.702
Si022186m.g
Setaria italica
Si022186m.g
I
0.702
Pavir.J02216
Panicum virgatum
Pavir.J02216
I
0.702
Pavir.J34675
Panicum virgatum
Pavir.J34675
I
0.702
GSMUA_Achr3G03630_001
Musa acuminata
GSMUA_Achr3G03630_001
I
0.701
OB11G11380
Oryza brachyantha
OB11G11380
I
0.701
OB12G11690
Oryza brachyantha
OB12G11690
I
0.701
ORGLA11G0014900
Oryza glaberrima
ORGLA11G0014900
I
0.701
OS12G0126300
Oryza sativa
OS12G0126300
I
0.701
Solyc01g096860.1
Solanum lycopersicum
Solyc01g096860.1
I
0.699
GRMZM2G174834
Zea mays
GRMZM2G174834
I
0.698
Aquca_002_00506
Aquilegia coerulea
Aquca_002_00506
I
0.698
Aquca_016_00348
Aquilegia coerulea
Aquca_016_00348
I
0.698
GSMUA_Achr8G09350_001
Musa acuminata
GSMUA_Achr8G09350_001
I
0.697
BRADI2G18570
Brachypodium distachyon
BRADI2G18570
I
0.696
F775_02400
Aegilops tauschii
F775_02400
I
0.696
TCM_044588
Theobroma cacao
TCM_044588
I
0.696
TRIUR3_01982
Triticum urartu
TRIUR3_01982
I
0.696
Gorai.009G122000
Gossypium raimondii
Gorai.009G122000
I
0.696
Bo6g067950
Brassica oleracea
Bo6g067950
I
0.695
Eucgr.F03987
Eucalyptus grandis
Eucgr.F03987
I
0.695
Gorai.009G008800
Gossypium raimondii
Gorai.009G008800
I
0.695
Pavir.Bb02213
Panicum virgatum
Pavir.Bb02213
I
0.695
SapurV1A.0036s0830
Salix purpurea
SapurV1A.0036s0830
N
0.695
BGIOSGA030783
Oryza indica
BGIOSGA030783
I
0.694
OB09G17420
Oryza brachyantha
OB09G17420
I
0.694
OGLUM09G11130
Oryza glumaepatula
OGLUM09G11130
I
0.694
ONIVA09G10420
Oryza nivara
ONIVA09G10420
I
0.694
ORGLA09G0079700
Oryza glaberrima
ORGLA09G0079700
I
0.694
OS09G0423800
Oryza sativa
OS09G0423800
I
0.694
Sb02g025080
Sorghum bicolor
Sb02g025080
I
0.694
Si030129m.g
Setaria italica
Si030129m.g
I
0.694
WRI1
Arabidopsis thaliana
AT3G54320
I
0.693
Bo8g083590
Brassica oleracea
Bo8g083590
I
0.693
GLYMA07G02380
Glycine max
GLYMA07G02380
I
0.693
GLYMA08G23630
Glycine max
GLYMA08G23630
I
0.693
GRMZM2G124524
Zea mays
GRMZM2G124524
I
0.693
GRMZM2G141219
Zea mays
GRMZM2G141219
I
0.693
Sb05g001790
Sorghum bicolor
Sb05g001790
I
0.693
Bostr.0697s0045
Boechera stricta
Bostr.0697s0045
I
0.693
Cagra.0562s0024
Capsella grandiflora
Cagra.0562s0024
I
0.693
Carubv10018845m.g
Capsella rubella
Carubv10018845m.g
I
0.693
AMTR_s00019p00086450
Amborella trichopoda
AMTR_s00019p00086450
I
0.692
Gorai.011G225700
Gossypium raimondii
Gorai.011G225700
I
0.692
PK04008.1
Cannabis sativa
PK04008.1
I
0.692
PK26651.1
Cannabis sativa
PK26651.1
I
0.692
Solyc03g117720.2
Solanum lycopersicum
Solyc03g117720.2
I
0.690
Gorai.013G003400
Gossypium raimondii
Gorai.013G003400
I
0.690
Bra035137
Brassica rapa
Bra035137
I
0.689
POPTR_0001s03300
Populus trichocarpa
POPTR_0001s03300
I
0.689
PRUPE_ppa023152mg
Prunus persica
PRUPE_ppa023152mg
I
0.689
TCM_027569
Theobroma cacao
TCM_027569
I
0.689
VIT_09s0018g01650
Vitis vinifera
VIT_09s0018g01650
I
0.689
Pm008629
Prunus mume
Pm008629
I
0.689
mgf008907m
Mimulus guttatus
mgf008907m
I
0.689
Eucgr.B03412
Eucalyptus grandis
Eucgr.B03412
I
0.689
Eucgr.C00238
Eucalyptus grandis
Eucgr.C00238
N
0.689
evm.TU.supercontig_199.10
Carica papaya
evm.TU.supercontig_199.10
I
0.689
Gorai.012G098200
Gossypium raimondii
Gorai.012G098200
I
0.689
Lus10041618.g
Linum usitatissimum
Lus10041618.g
I
0.689
SapurV1A.0153s0330
Salix purpurea
SapurV1A.0153s0330
I
0.689
SapurV1A.1535s0040
Salix purpurea
SapurV1A.1535s0040
I
0.689
SapurV1A.1603s0090
Salix purpurea
SapurV1A.1603s0090
I
0.689
Aquca_048_00034
Aquilegia coerulea
Aquca_048_00034
I
0.688
BRADI4G30617
Brachypodium distachyon
BRADI4G30617
I
0.687
Traes_5BL_B6C71B544
Triticum aestivum
Traes_5BL_B6C71B544
I
0.687
Lus10013268.g
Linum usitatissimum
Lus10013268.g
N
0.687
GLYMA18G16236
Glycine max
GLYMA18G16236
N
0.686
Cla017294
Citrullus lanatus
Cla017294
N
0.686
Bostr.20129s0410
Boechera stricta
Bostr.20129s0410
I
0.686
Lus10024101.g
Linum usitatissimum
Lus10024101.g
I
0.686
AT1G79700
Arabidopsis thaliana
AT1G79700
I
0.685
GLYMA08G40831
Glycine max
GLYMA08G40831
N
0.685
Cucsa.170790
Cucumis sativus
Cucsa.170790
I
0.685
OB05G31600
Oryza brachyantha
OB05G31600
I
0.683
Si007857m.g
Setaria italica
Si007857m.g
N
0.683
Traes_7AS_A70A185F1
Triticum aestivum
Traes_7AS_A70A185F1
N
0.683
cassava39084.m1
Manihot esculenta
cassava39084.m1
I
0.683
Aquca_074_00065
Aquilegia coerulea
Aquca_074_00065
I
0.683
Cagra.1725s0044
Capsella grandiflora
Cagra.1725s0044
I
0.683
MDP0000186581
Malus domestica
MDP0000186581
N
0.683
MDP0000297698
Malus domestica
MDP0000297698
N
0.683
BGIOSGA017664
Oryza indica
BGIOSGA017664
I
0.682
fgenesh2_kg.2__2276__AT1G79700.2
Arabidopsis lyrata
fgenesh2_kg.2__2276__AT1G79700.2
I
0.682
OLONG_014256
Oryza longistaminata
OLONG_014256
I
0.682
OPUNC05G21440
Oryza punctata
OPUNC05G21440
I
0.682
OS05G0536250
Oryza sativa
OS05G0536250
I
0.682
Lus10036719.g
Linum usitatissimum
Lus10036719.g
I
0.682
Lus10037209.g
Linum usitatissimum
Lus10037209.g
I
0.682
TCM_018386
Theobroma cacao
TCM_018386
N
0.681
BGIOSGA021927
Oryza indica
BGIOSGA021927
N
0.680
GRMZM2G073982
Zea mays
GRMZM2G073982
N
0.680
OBART06G03040
Oryza barthii
OBART06G03040
N
0.680
ONIVA06G03970
Oryza nivara
ONIVA06G03970
N
0.680
ORGLA06G0029800
Oryza glaberrima
ORGLA06G0029800
N
0.680
ORUFI06G03000
Oryza rufipogon
ORUFI06G03000
N
0.680
Sb10g003160
Sorghum bicolor
Sb10g003160
N
0.680
Ciclev10025985m.g
Citrus clementina
Ciclev10025985m.g
I
0.680
gene01262-v1.0-hybrid
Fragaria vesca
gene01262-v1.0-hybrid
I
0.680
Lus10005253.g
Linum usitatissimum
Lus10005253.g
N
0.680
Lus10030671.g
Linum usitatissimum
Lus10030671.g
N
0.680
Lus10030792.g
Linum usitatissimum
Lus10030792.g
N
0.680
MDP0000281784
Malus domestica
MDP0000281784
I
0.680
orange1.1g018990m.g
Citrus sinensis
orange1.1g018990m.g
I
0.680
Pavir.J19507
Panicum virgatum
Pavir.J19507
N
0.680
PK24809.1
Cannabis sativa
PK24809.1
I
0.679
MDP0000166059
Malus domestica
MDP0000166059
N
0.678
MDP0000206674
Malus domestica
MDP0000206674
N
0.678
Solyc12g010490.1
Solanum lycopersicum
Solyc12g010490.1
N
0.677