WRI1 (Arabidopsis lyrata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 fgenesh2_kg.5__1822__AT3G54320.1 T001681_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.5__1822__AT3G54320.1 AP2 64 121
fgenesh2_kg.5__1822__AT3G54320.1 AP2 163 215

Links

Other AP2 family TFs
Other Arabidopsis lyrata TFs

288 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thhalv10010394m.g Eutrema salsugineum Thhalv10010394m.g N 0.932
Bra007066 Brassica rapa Bra007066 N 0.931
Pm017032 Prunus mume Pm017032 N 0.931
Bra003178 Brassica rapa Bra003178 N 0.929
30069.m000440 Ricinus communis 30069.m000440 N 0.926
evm.TU.supercontig_54.28 Carica papaya evm.TU.supercontig_54.28 N 0.922
cassava16315.m1 Manihot esculenta cassava16315.m1 N 0.917
Ciclev10003896m.g Citrus clementina Ciclev10003896m.g N 0.916
orange1.1g036423m.g Citrus sinensis orange1.1g036423m.g N 0.916
SELMODRAFT_85823 Selaginella moellendorffii SELMODRAFT_85823 N 0.907
Cla020765 Citrullus lanatus Cla020765 N 0.906
MTR_8g044070 Medicago truncatula MTR_8g044070 N 0.889
gene00377-v1.0-hybrid Fragaria vesca gene00377-v1.0-hybrid N 0.888
WRI1 Arabidopsis thaliana AT3G54320 I 0.883
Bo8g083590 Brassica oleracea Bo8g083590 I 0.883
Bostr.0697s0045 Boechera stricta Bostr.0697s0045 I 0.883
Cagra.0562s0024 Capsella grandiflora Cagra.0562s0024 I 0.883
Carubv10018845m.g Capsella rubella Carubv10018845m.g I 0.883
GLYMA08G23630 Glycine max GLYMA08G23630 I 0.882
Bo6g067950 Brassica oleracea Bo6g067950 I 0.880
Ca_17532 Cicer arietinum Ca_17532 N 0.880
MTR_4g007770 Medicago truncatula MTR_4g007770 N 0.878
GRMZM2G124524 Zea mays GRMZM2G124524 I 0.875
Sb05g001790 Sorghum bicolor Sb05g001790 I 0.875
POPTR_0010s25340 Populus trichocarpa POPTR_0010s25340 N 0.871
Si012026m.g Setaria italica Si012026m.g N 0.870
Si026433m.g Setaria italica Si026433m.g N 0.870
TCM_044588 Theobroma cacao TCM_044588 I 0.869
PGSC0003DMG400027502 Solanum tuberosum PGSC0003DMG400027502 N 0.868
Gorai.011G225700 Gossypium raimondii Gorai.011G225700 I 0.867
AMTR_s00101p00022740 Amborella trichopoda AMTR_s00101p00022740 N 0.865
OPUNC08G14310 Oryza punctata OPUNC08G14310 N 0.865
MTR_8g044040 Medicago truncatula MTR_8g044040 N 0.863
PK04008.1 Cannabis sativa PK04008.1 I 0.861
MTR_2g460730 Medicago truncatula MTR_2g460730 N 0.860
POPTR_0018s11110 Populus trichocarpa POPTR_0018s11110 N 0.860
Ciclev10010237m.g Citrus clementina Ciclev10010237m.g N 0.860
Lus10001553.g Linum usitatissimum Lus10001553.g N 0.860
chr6.CM0041.30.nd Lotus japonicus chr6.CM0041.30.nd N 0.860
LPERR08G13500 Leersia perrieri LPERR08G13500 N 0.859
OGLUM08G17060 Oryza glumaepatula OGLUM08G17060 N 0.859
OMERI08G13500 Oryza meridionalis OMERI08G13500 N 0.859
ONIVA08G17820 Oryza nivara ONIVA08G17820 N 0.859
ORUFI08G18170 Oryza rufipogon ORUFI08G18170 N 0.859
Lus10008939.g Linum usitatissimum Lus10008939.g N 0.857
Lus10028880.g Linum usitatissimum Lus10028880.g N 0.857
GLYMA04G24010 Glycine max GLYMA04G24010 N 0.856
GLYMA06G30840 Glycine max GLYMA06G30840 N 0.856
GLYMA08G24420 Glycine max GLYMA08G24420 N 0.856
TCM_038442 Theobroma cacao TCM_038442 N 0.856
gene27659-v1.0-hybrid Fragaria vesca gene27659-v1.0-hybrid N 0.856
MDP0000133423 Malus domestica MDP0000133423 N 0.856
MDP0000318457 Malus domestica MDP0000318457 N 0.856
Cucsa.282940 Cucumis sativus Cucsa.282940 N 0.855
Eucgr.F03987 Eucalyptus grandis Eucgr.F03987 I 0.855
Gorai.001G256900 Gossypium raimondii Gorai.001G256900 N 0.855
BRADI4G30617 Brachypodium distachyon BRADI4G30617 I 0.853
GLYMA15G34770 Glycine max GLYMA15G34770 N 0.853
LPERR09G07570 Leersia perrieri LPERR09G07570 N 0.853
OBART09G10730 Oryza barthii OBART09G10730 N 0.853
OGLUM09G11130 Oryza glumaepatula OGLUM09G11130 I 0.853
OMERI09G08520 Oryza meridionalis OMERI09G08520 N 0.853
ORUFI09G11510 Oryza rufipogon ORUFI09G11510 N 0.853
Si030129m.g Setaria italica Si030129m.g I 0.853
Gorai.006G025100 Gossypium raimondii Gorai.006G025100 N 0.853
GRMZM2G141219 Zea mays GRMZM2G141219 I 0.852
Ca_20689 Cicer arietinum Ca_20689 N 0.852
Cla019044 Citrullus lanatus Cla019044 N 0.852
evm.TU.supercontig_14.38 Carica papaya evm.TU.supercontig_14.38 N 0.852
BGIOSGA030783 Oryza indica BGIOSGA030783 I 0.851
OB09G17420 Oryza brachyantha OB09G17420 I 0.851
ONIVA09G10420 Oryza nivara ONIVA09G10420 I 0.851
ORGLA09G0079700 Oryza glaberrima ORGLA09G0079700 I 0.851
OS09G0423800 Oryza sativa OS09G0423800 I 0.851
POPTR_0001s03300 Populus trichocarpa POPTR_0001s03300 I 0.851
PRUPE_ppa007768mg Prunus persica PRUPE_ppa007768mg N 0.851
PRUPE_ppa023152mg Prunus persica PRUPE_ppa023152mg I 0.851
Sb02g025080 Sorghum bicolor Sb02g025080 I 0.851
Traes_5BL_B6C71B544 Triticum aestivum Traes_5BL_B6C71B544 I 0.851
VIT_09s0018g01650 Vitis vinifera VIT_09s0018g01650 I 0.851
Pm008629 Prunus mume Pm008629 I 0.851
Pm013856 Prunus mume Pm013856 N 0.851
Aquca_048_00034 Aquilegia coerulea Aquca_048_00034 I 0.851
evm.TU.supercontig_199.10 Carica papaya evm.TU.supercontig_199.10 I 0.851
Gorai.012G098200 Gossypium raimondii Gorai.012G098200 I 0.851
SapurV1A.0153s0330 Salix purpurea SapurV1A.0153s0330 I 0.851
SapurV1A.1535s0040 Salix purpurea SapurV1A.1535s0040 I 0.851
SapurV1A.1603s0090 Salix purpurea SapurV1A.1603s0090 I 0.851
TCM_027569 Theobroma cacao TCM_027569 I 0.850
Cla015555 Citrullus lanatus Cla015555 N 0.850
gene15913-v1.0-hybrid Fragaria vesca gene15913-v1.0-hybrid N 0.850
MDP0000231748 Malus domestica MDP0000231748 N 0.849
e_gw1.32.189.1 Physcomitrella patens e_gw1.32.189.1 N 0.848
Lus10041618.g Linum usitatissimum Lus10041618.g I 0.848
Cucsa.170790 Cucumis sativus Cucsa.170790 I 0.847
GLYMA02G36880 Glycine max GLYMA02G36880 I 0.846
GLYMA17G07860 Glycine max GLYMA17G07860 I 0.846
Pavir.Bb02213 Panicum virgatum Pavir.Bb02213 I 0.846
TRIUR3_24036 Triticum urartu TRIUR3_24036 N 0.845
Cucsa.106090 Cucumis sativus Cucsa.106090 N 0.845
mgf019814m Mimulus guttatus mgf019814m N 0.845
PK26651.1 Cannabis sativa PK26651.1 I 0.845
AMTR_s00019p00086450 Amborella trichopoda AMTR_s00019p00086450 I 0.844
Solyc03g117720.2 Solanum lycopersicum Solyc03g117720.2 I 0.844
mg013664m Mimulus guttatus mg013664m N 0.844
Lus10024101.g Linum usitatissimum Lus10024101.g I 0.844
GSMUA_Achr5G04670_001 Musa acuminata GSMUA_Achr5G04670_001 N 0.843
VIT_01s0026g01690 Vitis vinifera VIT_01s0026g01690 N 0.843
SapurV1A.0070s0630 Salix purpurea SapurV1A.0070s0630 N 0.842
GLYMA07G02380 Glycine max GLYMA07G02380 I 0.841
VIT_11s0037g00870 Vitis vinifera VIT_11s0037g00870 N 0.841
Aquca_016_00348 Aquilegia coerulea Aquca_016_00348 I 0.841
MTR_6g011490 Medicago truncatula MTR_6g011490 N 0.840
Ciclev10025985m.g Citrus clementina Ciclev10025985m.g I 0.840
Gorai.009G122000 Gossypium raimondii Gorai.009G122000 I 0.840
orange1.1g018990m.g Citrus sinensis orange1.1g018990m.g I 0.840
POPTR_0017s11470 Populus trichocarpa POPTR_0017s11470 N 0.839
PRUPE_ppa024318mg Prunus persica PRUPE_ppa024318mg N 0.839
VIT_14s0108g00050 Vitis vinifera VIT_14s0108g00050 N 0.839
29822.m003477 Ricinus communis 29822.m003477 N 0.839
cassava11368.m1 Manihot esculenta cassava11368.m1 N 0.839
BGIOSGA034580 Oryza indica BGIOSGA034580 N 0.838
BGIOSGA036704 Oryza indica BGIOSGA036704 N 0.838
OMERI11G02080 Oryza meridionalis OMERI11G02080 N 0.838
OMERI12G00060 Oryza meridionalis OMERI12G00060 N 0.838
ONIVA03G39530 Oryza nivara ONIVA03G39530 N 0.838
ONIVA11G01800 Oryza nivara ONIVA11G01800 N 0.838
OPUNC11G01540 Oryza punctata OPUNC11G01540 N 0.838
OPUNC12G01560 Oryza punctata OPUNC12G01560 N 0.838
ORGLA12G0015400 Oryza glaberrima ORGLA12G0015400 N 0.838
GRMZM2G174834 Zea mays GRMZM2G174834 I 0.836
Ca_10533 Cicer arietinum Ca_10533 N 0.836
Gorai.013G003400 Gossypium raimondii Gorai.013G003400 I 0.836
GSMUA_Achr3G03630_001 Musa acuminata GSMUA_Achr3G03630_001 I 0.835
Gorai.009G008800 Gossypium raimondii Gorai.009G008800 I 0.835
Ca_03306 Cicer arietinum Ca_03306 N 0.832
Bo6g124080 Brassica oleracea Bo6g124080 N 0.828
Gorai.012G056300 Gossypium raimondii Gorai.012G056300 N 0.828
MTR_4g130270 Medicago truncatula MTR_4g130270 I 0.827
Solyc12g010490.1 Solanum lycopersicum Solyc12g010490.1 N 0.827
SELMODRAFT_129793 Selaginella moellendorffii SELMODRAFT_129793 N 0.826
ADAP Arabidopsis lyrata fgenesh2_kg.1__1760__AT1G16060.1 N 0.825
30114.m000507 Ricinus communis 30114.m000507 N 0.825
Bostr.7128s0222 Boechera stricta Bostr.7128s0222 N 0.825
Eucgr.C00238 Eucalyptus grandis Eucgr.C00238 N 0.825
Bra035137 Brassica rapa Bra035137 I 0.824
Bostr.20129s0410 Boechera stricta Bostr.20129s0410 I 0.824
Eucgr.J00316 Eucalyptus grandis Eucgr.J00316 I 0.824
Bo5g021520 Brassica oleracea Bo5g021520 N 0.822
fgenesh2_kg.2__2276__AT1G79700.2 Arabidopsis lyrata fgenesh2_kg.2__2276__AT1G79700.2 I 0.822
Carubv10020688m.g Capsella rubella Carubv10020688m.g N 0.822
chr2.CM0225.20.nc Lotus japonicus chr2.CM0225.20.nc N 0.822
OPUNC09G09320 Oryza punctata OPUNC09G09320 N 0.821
SapurV1A.0036s0830 Salix purpurea SapurV1A.0036s0830 N 0.821
LPERR12G01610 Leersia perrieri LPERR12G01610 N 0.820
mgf008907m Mimulus guttatus mgf008907m I 0.820
OB11G11380 Oryza brachyantha OB11G11380 I 0.819
OB12G11690 Oryza brachyantha OB12G11690 I 0.819
ORGLA11G0014900 Oryza glaberrima ORGLA11G0014900 I 0.819
OS12G0126300 Oryza sativa OS12G0126300 I 0.819
Solyc06g068570.2 Solanum lycopersicum Solyc06g068570.2 I 0.819
ADAP Arabidopsis thaliana AT1G16060 I 0.818
BGIOSGA028751 Oryza indica BGIOSGA028751 I 0.818
OLONG_002862 Oryza longistaminata OLONG_002862 N 0.818
ORGLA08G0142100 Oryza glaberrima ORGLA08G0142100 I 0.818
OS08G0442400 Oryza sativa OS08G0442400 I 0.818
Thhalv10008118m.g Eutrema salsugineum Thhalv10008118m.g I 0.818
MTR_8g468920 Medicago truncatula MTR_8g468920 N 0.817
AMTR_s00202p00017170 Amborella trichopoda AMTR_s00202p00017170 N 0.816
AT1G79700 Arabidopsis thaliana AT1G79700 I 0.816
Traes_5AL_F8DEBE8E7 Triticum aestivum Traes_5AL_F8DEBE8E7 I 0.816
Traes_5DL_2CF55DD05 Triticum aestivum Traes_5DL_2CF55DD05 I 0.816
Carubv10010918m.g Capsella rubella Carubv10010918m.g N 0.816
Bra026082 Brassica rapa Bra026082 I 0.815
F775_06373 Aegilops tauschii F775_06373 N 0.815
BRADI2G48130 Brachypodium distachyon BRADI2G48130 N 0.814
chr2.CM0608.630.nc Lotus japonicus chr2.CM0608.630.nc N 0.814
BRADI4G43877 Brachypodium distachyon BRADI4G43877 I 0.812
Cagra.1725s0044 Capsella grandiflora Cagra.1725s0044 I 0.812
MTR_7g009410 Medicago truncatula MTR_7g009410 N 0.811
TCM_018386 Theobroma cacao TCM_018386 N 0.811
Ciclev10013824m.g Citrus clementina Ciclev10013824m.g N 0.811
Eucgr.J02131 Eucalyptus grandis Eucgr.J02131 N 0.811
orange1.1g042319m.g Citrus sinensis orange1.1g042319m.g N 0.811
Si007857m.g Setaria italica Si007857m.g N 0.810
Traes_7AS_A70A185F1 Triticum aestivum Traes_7AS_A70A185F1 N 0.810
PRUPE_ppa022978mg Prunus persica PRUPE_ppa022978mg N 0.809
Solyc01g096860.1 Solanum lycopersicum Solyc01g096860.1 I 0.809
Pm015847 Prunus mume Pm015847 N 0.809
mgf019116m Mimulus guttatus mgf019116m N 0.809
Lus10005253.g Linum usitatissimum Lus10005253.g N 0.809
Lus10030671.g Linum usitatissimum Lus10030671.g N 0.809
OBART12G01740 Oryza barthii OBART12G01740 N 0.808
POPTR_0010s10290 Populus trichocarpa POPTR_0010s10290 N 0.808
BGIOSGA021927 Oryza indica BGIOSGA021927 N 0.807
GRMZM2G073982 Zea mays GRMZM2G073982 N 0.807
OBART06G03040 Oryza barthii OBART06G03040 N 0.807
ONIVA06G03970 Oryza nivara ONIVA06G03970 N 0.807
ORGLA06G0029800 Oryza glaberrima ORGLA06G0029800 N 0.807
ORUFI06G03000 Oryza rufipogon ORUFI06G03000 N 0.807
Sb10g003160 Sorghum bicolor Sb10g003160 N 0.807
mgf017413m Mimulus guttatus mgf017413m N 0.807
Pavir.J19507 Panicum virgatum Pavir.J19507 N 0.807
GLYMA18G16236 Glycine max GLYMA18G16236 N 0.806
GSMUA_Achr8G09350_001 Musa acuminata GSMUA_Achr8G09350_001 I 0.806
PRUPE_ppa022243mg Prunus persica PRUPE_ppa022243mg N 0.806
Pm006561 Prunus mume Pm006561 N 0.806
GLYMA08G40831 Glycine max GLYMA08G40831 N 0.805
Traes_4AL_C863DCEDC Triticum aestivum Traes_4AL_C863DCEDC N 0.802
Pm015843 Prunus mume Pm015843 N 0.802
POPTR_0003s18350 Populus trichocarpa POPTR_0003s18350 N 0.800
Gorai.008G182500 Gossypium raimondii Gorai.008G182500 N 0.800
POPTR_0006s19360 Populus trichocarpa POPTR_0006s19360 N 0.798
TCM_011797 Theobroma cacao TCM_011797 N 0.798
Aquca_074_00065 Aquilegia coerulea Aquca_074_00065 I 0.798
cassava39084.m1 Manihot esculenta cassava39084.m1 I 0.797
evm.TU.contig_28586.3 Carica papaya evm.TU.contig_28586.3 N 0.797
Lus10036719.g Linum usitatissimum Lus10036719.g I 0.797
Lus10037209.g Linum usitatissimum Lus10037209.g I 0.797
GRMZM2G131266 Zea mays GRMZM2G131266 N 0.795
MDP0000186581 Malus domestica MDP0000186581 N 0.795
MDP0000281784 Malus domestica MDP0000281784 I 0.795
MDP0000297698 Malus domestica MDP0000297698 N 0.795
OS06G0145700 Oryza sativa OS06G0145700 N 0.794
PGSC0003DMG400002399 Solanum tuberosum PGSC0003DMG400002399 N 0.794
gene01262-v1.0-hybrid Fragaria vesca gene01262-v1.0-hybrid I 0.794
Lus10013268.g Linum usitatissimum Lus10013268.g N 0.794
Lus10030792.g Linum usitatissimum Lus10030792.g N 0.794
PK24809.1 Cannabis sativa PK24809.1 I 0.794
Eucgr.I01921 Eucalyptus grandis Eucgr.I01921 N 0.792
GLYMA09G37540 Glycine max GLYMA09G37540 N 0.791
GLYMA18G49101 Glycine max GLYMA18G49101 N 0.791
Solyc06g066390.1 Solanum lycopersicum Solyc06g066390.1 N 0.791
Ciclev10033673m.g Citrus clementina Ciclev10033673m.g N 0.791
SELMODRAFT_108361 Selaginella moellendorffii SELMODRAFT_108361 N 0.790
GRMZM2G113078 Zea mays GRMZM2G113078 I 0.788
LPERR05G19870 Leersia perrieri LPERR05G19870 I 0.788
OMERI01G26790 Oryza meridionalis OMERI01G26790 I 0.788
Sb09g026800 Sorghum bicolor Sb09g026800 I 0.788
SELMODRAFT_78076 Selaginella moellendorffii SELMODRAFT_78076 N 0.788
Si022186m.g Setaria italica Si022186m.g I 0.788
Cagra.2238s0017 Capsella grandiflora Cagra.2238s0017 N 0.788
Pavir.J02216 Panicum virgatum Pavir.J02216 I 0.788
Pavir.J34675 Panicum virgatum Pavir.J34675 I 0.788
BRADI3G36820 Brachypodium distachyon BRADI3G36820 N 0.786
PDK_20s13009417g005 Phoenix dactylifera PDK_20s13009417g005 N 0.784
MDP0000206674 Malus domestica MDP0000206674 N 0.783
LjSGA_030627.1 Lotus japonicus LjSGA_030627.1 N 0.783
BRADI2G18570 Brachypodium distachyon BRADI2G18570 I 0.782
F775_02400 Aegilops tauschii F775_02400 I 0.782
TRIUR3_01982 Triticum urartu TRIUR3_01982 I 0.782
Thhalv10018877m.g Eutrema salsugineum Thhalv10018877m.g N 0.782
Sb07g021800 Sorghum bicolor Sb07g021800 N 0.775
OMERI06G03270 Oryza meridionalis OMERI06G03270 N 0.774
Si013842m.g Setaria italica Si013842m.g N 0.770
MDP0000166059 Malus domestica MDP0000166059 N 0.770
BGIOSGA017664 Oryza indica BGIOSGA017664 I 0.769
OB05G31600 Oryza brachyantha OB05G31600 I 0.769
OLONG_014256 Oryza longistaminata OLONG_014256 I 0.769
OPUNC05G21440 Oryza punctata OPUNC05G21440 I 0.769
OS05G0536250 Oryza sativa OS05G0536250 I 0.769
F775_02064 Aegilops tauschii F775_02064 N 0.763
Aquca_002_00506 Aquilegia coerulea Aquca_002_00506 I 0.763
Eucgr.B03412 Eucalyptus grandis Eucgr.B03412 I 0.763
orange1.1g043551m.g Citrus sinensis orange1.1g043551m.g N 0.763
WRI1 Vitis vinifera VIT_13s0047g00340 N 0.757
Cla017294 Citrullus lanatus Cla017294 N 0.755
Pavir.J08481 Panicum virgatum Pavir.J08481 N 0.753
Pavir.J34903 Panicum virgatum Pavir.J34903 N 0.753
e_gw1.261.8.1 Physcomitrella patens e_gw1.261.8.1 N 0.750
Traes_1BL_3EFA4A82D Triticum aestivum Traes_1BL_3EFA4A82D N 0.747
OB01G43640 Oryza brachyantha OB01G43640 N 0.746
OB08G23780 Oryza brachyantha OB08G23780 N 0.745
LPERR01G30020 Leersia perrieri LPERR01G30020 N 0.740
OGLUM11G01480 Oryza glumaepatula OGLUM11G01480 N 0.739
GRMZM2G451031 Zea mays GRMZM2G451031 N 0.735
TRIUR3_04644 Triticum urartu TRIUR3_04644 N 0.725
Sb03g037750 Sorghum bicolor Sb03g037750 N 0.724
POPTR_0008s01260 Populus trichocarpa POPTR_0008s01260 N 0.720
Si004222m.g Setaria italica Si004222m.g N 0.705
BGIOSGA004677 Oryza indica BGIOSGA004677 N 0.696
OBART01G34800 Oryza barthii OBART01G34800 N 0.696
OGLUM01G38820 Oryza glumaepatula OGLUM01G38820 N 0.696
ONIVA01G39780 Oryza nivara ONIVA01G39780 N 0.696
ORGLA01G0286200 Oryza glaberrima ORGLA01G0286200 N 0.696
ORUFI01G38130 Oryza rufipogon ORUFI01G38130 N 0.696
Pavir.Ea03213 Panicum virgatum Pavir.Ea03213 N 0.689
GSMUA_Achr3G32510_001 Musa acuminata GSMUA_Achr3G32510_001 N 0.682